ConSurf Quick Analysis Procedure: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) No edit summary |
Eric Martz (talk | contribs) No edit summary |
||
| Line 7: | Line 7: | ||
<li> Enter your [[PDB code]] (or upload your [[Atomic coordinate file|PDB file]]). | <li> Enter your [[PDB code]] (or upload your [[Atomic coordinate file|PDB file]]). | ||
<li> Choose one chain from the pull-down ''Select chain identifier'' menu. (ConSurf can only analyze [[Conservation%2C_Evolutionary#Use_Caution_When_Comparing_Conservation_of_Sequence-Different_Chains|one chain at a time]]. Get chain IDs by examining the model in | <li> Choose one chain from the pull-down ''Select chain identifier'' menu. (ConSurf can only analyze [[Conservation%2C_Evolutionary#Use_Caution_When_Comparing_Conservation_of_Sequence-Different_Chains|one chain at a time]]. Get chain IDs by examining the model in | ||
[[FirstGlance in Jmol]] | [[FirstGlance in Jmol]] | ||
<ul>You will likely be offered a pre-calculated result in the ConSurf DataBase <i>ConSurf<b>DB</b></i>, but it cannot be used in [[FirstGlance in Jmol]], which has many powerful conveniences for [[FirstGlance/Visualizing Conservation|visualizing conservation patterns]]. Continue with the steps below to get a FirstGlance-compatible result.</ul> | |||
< | |||
<li>Enter a job title, which should include the [[PDB code]] or protein name. | <li>Enter a job title, which should include the [[PDB code]] or protein name. | ||
<li> Enter your email address. | <li> Enter your email address. | ||
