9fz6: Difference between revisions
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==A 2.58A crystal structure of S. aureus DNA gyrase and DNA with metals identified through anomalous scattering== | |||
<StructureSection load='9fz6' size='340' side='right'caption='[[9fz6]], [[Resolution|resolution]] 2.58Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9fz6]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/DNA_molecule DNA molecule] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9FZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9FZ6 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.58Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9fz6 OCA], [https://pdbe.org/9fz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9fz6 RCSB], [https://www.ebi.ac.uk/pdbsum/9fz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9fz6 ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: Duman | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/GYRA_STAAU GYRA_STAAU] A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.[HAMAP-Rule:MF_01897] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: DNA molecule]] | |||
[[Category: Large Structures]] | |||
[[Category: Staphylococcus aureus]] | |||
[[Category: Bax BD]] | |||
[[Category: Duman R]] | |||
[[Category: Morgan H]] | |||
[[Category: Warren AJ]] | |||
Latest revision as of 07:14, 23 October 2024
A 2.58A crystal structure of S. aureus DNA gyrase and DNA with metals identified through anomalous scattering
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