9gng: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 9gng is ~~ON HOLD until Paper Publication~~

==mouse VDAC1 in complex with MPD==

~~Authors~~: ~~Lolicato~~, M., ~~Arrigoni~~, C.

== Structural highlights ==

<table><tr><td colspan='2'>[[9gng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9GNG OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9GNG FirstGlance].

~~Description~~: ~~mouse VDAC1~~ in complex ~~with MPD~~

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PX4:1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PX4</scene></td></tr>

[[Category: ~~Lolicato, M~~]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9gng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9gng OCA], [https://pdbe.org/9gng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9gng RCSB], [https://www.ebi.ac.uk/pdbsum/9gng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9gng ProSAT]</td></tr>

[[Category: Arrigoni, C]]

</table>

== Function ==

[https://www.uniprot.org/uniprot/VDAC1_MOUSE VDAC1_MOUSE] Forms a channel through the mitochondrial outer membrane and also the plasma membrane. The channel at the outer mitochondrial membrane allows diffusion of small hydrophilic molecules; in the plasma membrane it is involved in cell volume regulation and apoptosis. It adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis.<ref>PMID:10716730</ref> <ref>PMID:15477379</ref> <ref>PMID:18988731</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Mus musculus]]

[[Category: Arrigoni C]]

[[Category: Lolicato M]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9gng is ON HOLD  until Paper Publication
+==mouse VDAC1 in complex with MPD==
+<StructureSection load='9gng' size='340' side='right'caption='[[9gng]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-Authors: Lolicato, M., Arrigoni, C.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9gng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9GNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9GNG FirstGlance]. <br>
-Description: mouse VDAC1 in complex with MPD
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PX4:1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PX4</scene></td></tr>
-[[Category: Lolicato, M]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9gng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9gng OCA], [https://pdbe.org/9gng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9gng RCSB], [https://www.ebi.ac.uk/pdbsum/9gng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9gng ProSAT]</span></td></tr>
-[[Category: Arrigoni, C]]
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/VDAC1_MOUSE VDAC1_MOUSE] Forms a channel through the mitochondrial outer membrane and also the plasma membrane. The channel at the outer mitochondrial membrane allows diffusion of small hydrophilic molecules; in the plasma membrane it is involved in cell volume regulation and apoptosis. It adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis.<ref>PMID:10716730</ref> <ref>PMID:15477379</ref> <ref>PMID:18988731</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Mus musculus]]
+[[Category: Arrigoni C]]
+[[Category: Lolicato M]]