1tyj: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1tyj.gif|left|200px]]
{{Seed}}
[[Image:1tyj.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1tyj|  PDB=1tyj  |  SCENE=  }}  
{{STRUCTURE_1tyj|  PDB=1tyj  |  SCENE=  }}  


'''Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens'''
===Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens===




==Overview==
<!--
The incorporation of enzymes into the multi-enzyme cellulosome complex and its anchoring to the bacterial cell surface are dictated by a set of binding interactions between two complementary protein modules: the cohesin and the dockerin. In this work, the X-ray crystal structure of a type-II cohesin from scaffoldin A of Bacteroides cellulosolvens has been determined to a resolution of 1.6 angstroms using molecular replacement. The type-II B. cellulosolvens cohesin (Bc-cohesin-II) is the first detailed description of a crystal structure for a type-II cohesin, and its features were compared with the known type-I cohesins from Clostridium thermocellum and Clostridium cellulolyticum (Ct-cohesin-I and Cc-cohesin-I, respectively). The overall jelly-roll topology of the type-II Bc-cohesin is very similar to that observed for the type-I cohesins with three additional secondary structures: an alpha-helix and two "beta-flaps" that disrupt the normal course of a beta-strand. In addition, beta-strand 5 is elevated by approximately 4 angstroms on the surface of the molecule, relative to the type-I Ct and Cc-cohesins. Like its type-I analogue, the hydrophobic/aromatic core of Bc-cohesin-II comprises an upper and lower core, but an additional aromatic patch and conserved tryptophan at the crown of the molecule serves to stabilize the alpha-helix of the type-II cohesin. Comparison of Bc-cohesin-II with the known type-I cohesin-dockerin heterodimer suggests that each of the additional secondary structural elements assumes a flanking position relative to the putative dockerin-binding surface. The raised ridge formed by beta-strand 5 confers additional distinctive topographic features to the proposed binding interface that collectively distinguish between the type-II and type-I cohesins.
The line below this paragraph, {{ABSTRACT_PUBMED_15808849}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15808849 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15808849}}


==About this Structure==
==About this Structure==
Line 33: Line 37:
[[Category: Dockerin-binding module]]
[[Category: Dockerin-binding module]]
[[Category: Flap]]
[[Category: Flap]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 10:31:25 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 17:06:31 2008''