9mc1: Difference between revisions
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==Trans-acting enoylreductase PhiaB involved in the phialotideA biosynthesis pathway== | |||
<StructureSection load='9mc1' size='340' side='right'caption='[[9mc1]], [[Resolution|resolution]] 2.90Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9mc1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudophialophora Pseudophialophora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9MC1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9MC1 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9mc1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9mc1 OCA], [https://pdbe.org/9mc1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9mc1 RCSB], [https://www.ebi.ac.uk/pdbsum/9mc1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9mc1 ProSAT]</span></td></tr> | |||
</table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Fungal polyketides are diverse natural products synthesized by iterative polyketide synthases (i-PKSs) and modified by enzymes such as trans-acting enoylreductases (trans-ERs). In this study, we investigated PhiaB and PhomB, trans-ERs involved in the biosynthesis of polyhydroxy polyketides, phialotides, and phomenoic acids. In vitro assays using substrate analogs revealed distinct chain-length preferences. X-ray structural analysis of PhiaB revealed distinct N-terminal, central, and C-terminal regions. The importance of the central region, which possesses a canonical Rossmann fold for cofactor recognition, was further supported by biosynthetic refactoring using a chimeric enzyme. Docking studies revealed key amino acid residues that may be involved in substrate/cofactor recognition. These findings advance our understanding of trans-ER function, providing opportunities for the synthesis of structurally different polyhydroxy polyketides by genetic engineering of polyhydroxy polyketide biosynthesis. | |||
Chain-length preference of trans-acting enoylreductases involved in the biosynthesis of fungal polyhydroxy polyketides.,Takekawa Y, Takino J, Sato S, Oikawa H, Ose T, Minami A Biochem Biophys Res Commun. 2025 May 1;761:151737. doi: , 10.1016/j.bbrc.2025.151737. Epub 2025 Apr 1. PMID:40186921<ref>PMID:40186921</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 9mc1" style="background-color:#fffaf0;"></div> | ||
[[Category: Minami | == References == | ||
[[Category: | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: Sato | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Yabuno | [[Category: Pseudophialophora]] | ||
[[Category: Minami A]] | |||
[[Category: Oikawa H]] | |||
[[Category: Ose T]] | |||
[[Category: Sato S]] | |||
[[Category: Takekawa Y]] | |||
[[Category: Takino J]] | |||
[[Category: Yabuno N]] | |||