9ly5: Difference between revisions

Latest revision as of 07:46, 4 March 2026

antibody 20G5 Fab in complex with human B7-H3 (IgC)

Structural highlights

9ly5 is a 3 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	Electron Microscopy, Resolution 2.98Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CD276_HUMAN May participate in the regulation of T-cell-mediated immune response. May play a protective role in tumor cells by inhibiting natural-killer mediated cell lysis as well as a role of marker for detection of neuroblastoma cells. May be involved in the development of acute and chronic transplant rejection and in the regulation of lymphocytic activity at mucosal surfaces. Could also play a key role in providing the placenta and fetus with a suitable immunological environment throughout pregnancy. Both isoform 1 and isoform 2 appear to be redundant in their ability to modulate CD4 T-cell responses. Isoform 2 is shown to enhance the induction of cytotoxic T-cells and selectively stimulates interferon gamma production in the presence of T-cell receptor signaling.^[1] ^[2] ^[3] ^[4] ^[5] ^[6]

References

↑ Chapoval AI, Ni J, Lau JS, Wilcox RA, Flies DB, Liu D, Dong H, Sica GL, Zhu G, Tamada K, Chen L. B7-H3: a costimulatory molecule for T cell activation and IFN-gamma production. Nat Immunol. 2001 Mar;2(3):269-74. PMID:11224528 doi:10.1038/85339
↑ Ling V, Wu PW, Spaulding V, Kieleczawa J, Luxenberg D, Carreno BM, Collins M. Duplication of primate and rodent B7-H3 immunoglobulin V divergent history of functional redundancy and exon loss. Genomics. 2003 Sep;82(3):365-77. PMID:12906861 doi:10.1016/s0888-7543(03)00126-5
↑ Steinberger P, Majdic O, Derdak SV, Pfistershammer K, Kirchberger S, Klauser C, Zlabinger G, Pickl WF, Stöckl J, Knapp W. Molecular characterization of human 4Ig-B7-H3, a member of the B7 family with four Ig-like domains. J Immunol. 2004 Feb 15;172(4):2352-9. PMID:14764704 doi:10.4049/jimmunol.172.4.2352
↑ Castriconi R, Dondero A, Augugliaro R, Cantoni C, Carnemolla B, Sementa AR, Negri F, Conte R, Corrias MV, Moretta L, Moretta A, Bottino C. Identification of 4Ig-B7-H3 as a neuroblastoma-associated molecule that exerts a protective role from an NK cell-mediated lysis. Proc Natl Acad Sci U S A. 2004 Aug 24;101(34):12640-5. PMID:15314238 doi:10.1073/pnas.0405025101
↑ Wang L, Fraser CC, Kikly K, Wells AD, Han R, Coyle AJ, Chen L, Hancock WW. B7-H3 promotes acute and chronic allograft rejection. Eur J Immunol. 2005 Feb;35(2):428-38. PMID:15682454 doi:https://dx.doi.org/10.1002/eji.200425518
↑ Kim J, Myers AC, Chen L, Pardoll DM, Truong-Tran QA, Lane AP, McDyer JF, Fortuno L, Schleimer RP. Constitutive and inducible expression of b7 family of ligands by human airway epithelial cells. Am J Respir Cell Mol Biol. 2005 Sep;33(3):280-9. PMID:15961727 doi:10.1165/rcmb.2004-0129OC

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OCA

[1] Chapoval AI, Ni J, Lau JS, Wilcox RA, Flies DB, Liu D, Dong H, Sica GL, Zhu G, Tamada K, Chen L. B7-H3: a costimulatory molecule for T cell activation and IFN-gamma production. Nat Immunol. 2001 Mar;2(3):269-74. PMID:11224528 doi:10.1038/85339

[2] Ling V, Wu PW, Spaulding V, Kieleczawa J, Luxenberg D, Carreno BM, Collins M. Duplication of primate and rodent B7-H3 immunoglobulin V divergent history of functional redundancy and exon loss. Genomics. 2003 Sep;82(3):365-77. PMID:12906861 doi:10.1016/s0888-7543(03)00126-5

[3] Steinberger P, Majdic O, Derdak SV, Pfistershammer K, Kirchberger S, Klauser C, Zlabinger G, Pickl WF, Stöckl J, Knapp W. Molecular characterization of human 4Ig-B7-H3, a member of the B7 family with four Ig-like domains. J Immunol. 2004 Feb 15;172(4):2352-9. PMID:14764704 doi:10.4049/jimmunol.172.4.2352

[4] Castriconi R, Dondero A, Augugliaro R, Cantoni C, Carnemolla B, Sementa AR, Negri F, Conte R, Corrias MV, Moretta L, Moretta A, Bottino C. Identification of 4Ig-B7-H3 as a neuroblastoma-associated molecule that exerts a protective role from an NK cell-mediated lysis. Proc Natl Acad Sci U S A. 2004 Aug 24;101(34):12640-5. PMID:15314238 doi:10.1073/pnas.0405025101

[5] Wang L, Fraser CC, Kikly K, Wells AD, Han R, Coyle AJ, Chen L, Hancock WW. B7-H3 promotes acute and chronic allograft rejection. Eur J Immunol. 2005 Feb;35(2):428-38. PMID:15682454 doi:https://dx.doi.org/10.1002/eji.200425518

[6] Kim J, Myers AC, Chen L, Pardoll DM, Truong-Tran QA, Lane AP, McDyer JF, Fortuno L, Schleimer RP. Constitutive and inducible expression of b7 family of ligands by human airway epithelial cells. Am J Respir Cell Mol Biol. 2005 Sep;33(3):280-9. PMID:15961727 doi:10.1165/rcmb.2004-0129OC

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[2]

[3]

[4]

[5]

[6]

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9ly5 is ON HOLD  until Paper Publication
+==antibody 20G5 Fab in complex with human B7-H3 (IgC)==
+<StructureSection load='9ly5' size='340' side='right'caption='[[9ly5]], [[Resolution|resolution]] 2.98&Aring;' scene=''>
-Authors: Bin, L., Shuaixiang, Z., kaijie, H.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9ly5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9LY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9LY5 FirstGlance]. <br>
-Description: antibody 20G5 Fab in complex with human B7-H3 (IgC)
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.98&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9ly5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ly5 OCA], [https://pdbe.org/9ly5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9ly5 RCSB], [https://www.ebi.ac.uk/pdbsum/9ly5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9ly5 ProSAT]</span></td></tr>
-[[Category: Shuaixiang, Z]]
+</table>
-[[Category: Bin, L]]
+== Function ==
-[[Category: Kaijie, H]]
+[https://www.uniprot.org/uniprot/CD276_HUMAN CD276_HUMAN] May participate in the regulation of T-cell-mediated immune response. May play a protective role in tumor cells by inhibiting natural-killer mediated cell lysis as well as a role of marker for detection of neuroblastoma cells. May be involved in the development of acute and chronic transplant rejection and in the regulation of lymphocytic activity at mucosal surfaces. Could also play a key role in providing the placenta and fetus with a suitable immunological environment throughout pregnancy. Both isoform 1 and isoform 2 appear to be redundant in their ability to modulate CD4 T-cell responses. Isoform 2 is shown to enhance the induction of cytotoxic T-cells and selectively stimulates interferon gamma production in the presence of T-cell receptor signaling.<ref>PMID:11224528</ref> <ref>PMID:12906861</ref> <ref>PMID:14764704</ref> <ref>PMID:15314238</ref> <ref>PMID:15682454</ref> <ref>PMID:15961727</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Homo sapiens]]
+[[Category: Large Structures]]
+[[Category: Bin L]]
+[[Category: Shuaixiang Z]]
+[[Category: Kaijie H]]

9ly5: Difference between revisions

Latest revision as of 07:46, 4 March 2026

antibody 20G5 Fab in complex with human B7-H3 (IgC)

Structural highlights

Function

References

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