9lyh: Difference between revisions

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'''Unreleased structure'''


The entry 9lyh is ON HOLD until Paper Publication
==Solution NMR structure of the rosin A1 lanthipeptide==
<StructureSection load='9lyh' size='340' side='right'caption='[[9lyh]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[9lyh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Microbispora Microbispora]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9LYH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9LYH FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, models</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2KT:2-KETOBUTYRIC+ACID'>2KT</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=DBB:D-ALPHA-AMINOBUTYRIC+ACID'>DBB</scene>, <scene name='pdbligand=DBU:(2Z)-2-AMINOBUT-2-ENOIC+ACID'>DBU</scene>, <scene name='pdbligand=TEE:2-AMINO-ETHENETHIOL'>TEE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9lyh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9lyh OCA], [https://pdbe.org/9lyh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9lyh RCSB], [https://www.ebi.ac.uk/pdbsum/9lyh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9lyh ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
2-Aminovinyl-cysteine (AviCys) motifs represent a unique class of macrocyclic structures found in many ribosomally synthesized and post-translationally modified peptides (RiPPs). Despite their essential role in bioactivity, their biosynthetic machinery, particularly the cyclases catalyzing Avi-(Me)-Cys macrocyclization, has not been fully characterized. Herein, we report the discovery and biosynthetic elucidation of class V lanthipeptides rosin A1-A3, which feature a lanthionine (Lan) macrocycle and a C-terminal 2-aminovinyl-3-methyl-cysteine (AviMeCys) macrocycle. Rosins promote the migration of human foreskin fibroblast (HSF) cells, representing the first examples of lanthipeptides with cell migration-promoting activity. Comprehensive in vitro reconstitution revealed that the regio- and stereoselective AviMeCys macrocyclization is catalyzed by RosX, a newly identified cyclase with a kinase-like fold. Therefore, RosX-like cyclases, originally misannotated as kinase-like proteins, represent a unique class of cyclases that utilize the enethiol group for AviCys/AviMeCys macrocyclization. Furthermore, we demonstrate that Lan formation in rosins follows a substrate-controlled cyclization pathway with kinetic acceleration by the complex of kinase RosK and lyase RosY, which is distinct from the AviMeCys macrocyclization. This study resolves the long-standing ambiguity of enzymatic AviCys macrocyclization and provides a basis for biosynthetic exploration and bioengineering of AviCys-containing natural products across RiPP subfamilies.


Authors: Yao, H., Xie, X., Wang, H.
A Unique Class of Cyclases with a Kinase Fold Catalyzes Enethiol-Mediated Macrocyclization of Aminovinyl-Cysteine Motifs in Lanthipeptides.,Xie XQ, Guo W, Xia YZ, Liao LJ, Sun MX, Wang JX, Gao JT, Yao HW, Wang H ACS Cent Sci. 2025 Jun 18;11(7):1178-1188. doi: 10.1021/acscentsci.5c00569. , eCollection 2025 Jul 23. PMID:40726796<ref>PMID:40726796</ref>


Description: Solution NMR structure of the rosin A1 lanthipeptide
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Xie, X]]
<div class="pdbe-citations 9lyh" style="background-color:#fffaf0;"></div>
[[Category: Yao, H]]
== References ==
[[Category: Wang, H]]
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Microbispora]]
[[Category: Wang H]]
[[Category: Xie X]]
[[Category: Yao H]]

Latest revision as of 14:34, 10 February 2026

Solution NMR structure of the rosin A1 lanthipeptide

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