9r8i: Difference between revisions

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'''Unreleased structure'''


The entry 9r8i is ON HOLD  until Paper Publication
==sucrose hydrolase SuxB from Xanthomonas oryzae pv. oryzae==
<StructureSection load='9r8i' size='340' side='right'caption='[[9r8i]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[9r8i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9R8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9R8I FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9r8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9r8i OCA], [https://pdbe.org/9r8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9r8i RCSB], [https://www.ebi.ac.uk/pdbsum/9r8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9r8i ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The virulence of Xanthomonas oryzae pv. oryzae, the causal agent of bacterial blight (BB) of rice, critically depends on the activation of SWEET sucrose uniporters of the host. To date, the role of SWEET-released sucrose for virulence remains unclear. We here identified the sux locus of Xoo consisting of a LacI-type repressor (SuxR), an outer membrane TonB-like porin (SuxA), an inner membrane MFS H(+)-symporter (SuxC), and a cytosolic sucrose hydrolase (SuxB). Structural and functional analyses demonstrate that SuxB has exclusive sucrose hydrolase activity. Mutant analyses show that the transporter SuxC and the sucrose hydrolase are necessary for growth of bacteria on sucrose, while SuxA is not essential, likely due to the ability of other porins to transport sucrose across the outer membrane. Consistent with a role of SuxR as a sucrose repressor, transcriptome studies show sucrose-dependent regulation of the suxA/suxB genes. Besides a role of sucrose for reproduction, we found that sucrose promotes motility, extracellular polysaccharides production, biofilm formation, and virulence. Notably, the SuxC sucrose H(+)-symporter and the sucrose hydrolase SuxB were required for full virulence of Xoo on indica and japonica rice varieties. Our findings indicate that pathogen-induced sucrose efflux via SWEETs provides sucrose to Xoo, that Xoo uses the sux gene cluster to acquire and utilize sucrose, and that sucrose promotes bacterial fitness and xylem colonization.


Authors:  
A critical role of sux cistron-mediated sucrose uptake for virulence of the rice blight pathogen Xanthomonas oryzae pv. oryzae.,Zollner NR, Long J, Song C, Sharkey J, Wudick MM, Loo EPI, Sadoine M, Applegate V, Hoppner A, Smits SHJ, Yang B, Frommer WB PNAS Nexus. 2026 Jan 8;5(1):pgaf412. doi: 10.1093/pnasnexus/pgaf412. eCollection , 2026 Jan. PMID:41536522<ref>PMID:41536522</ref>


Description:  
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
<div class="pdbe-citations 9r8i" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Applegate V]]
[[Category: Hoeppner A]]
[[Category: Smits SHJ]]
[[Category: Zoellner N]]

Latest revision as of 07:56, 25 March 2026

sucrose hydrolase SuxB from Xanthomonas oryzae pv. oryzae

9r8i, resolution 2.40Å

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