Sandbox R.Nithin 6XWD: Difference between revisions

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* '''Domain III (201–303)''': helical region required for dimerization' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />   
* '''Domain III (201–303)''': helical region required for dimerization' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />   


Explore this in {{SceneLink|Sandbox_R.Nithin_6XWD|Overview}} and
{{SceneLink|Sandbox_R.Nithin_6XWD|Domains}}.


== Catalytic Site ==
== Catalytic Site ==
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Together, these interactions illustrate the principles of Mpro inhibitor design: accurate pocket fitting, hydrogen-bond anchoring in S1, hydrophobic complementarity in S2, and covalent engagement of Cys145.
Together, these interactions illustrate the principles of Mpro inhibitor design: accurate pocket fitting, hydrogen-bond anchoring in S1, hydrophobic complementarity in S2, and covalent engagement of Cys145.


Visualize the inhibitor bound in the active site here: 
 
* {{SceneLink|Sandbox_R.Nithin_6XWD|Inhibitor_Binding}}




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Overall, covalent inhibition represents a promising antiviral design approach because it combines high selectivity, strong binding, and long-lasting catalytic shutdown.
Overall, covalent inhibition represents a promising antiviral design approach because it combines high selectivity, strong binding, and long-lasting catalytic shutdown.


Visualize the covalent bond here:
* {{SceneLink|Sandbox_R.Nithin_6XWD|Covalent_Bond}}


== Biological Significance ==
== Biological Significance ==