9znp: Difference between revisions
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==Sub-tomogram averaged structure of E. Coli DNA protection during starvation protein (DPS)== | |||
<StructureSection load='9znp' size='340' side='right'caption='[[9znp]], [[Resolution|resolution]] 3.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9znp]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ZNP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9ZNP FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9znp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9znp OCA], [https://pdbe.org/9znp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9znp RCSB], [https://www.ebi.ac.uk/pdbsum/9znp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9znp ProSAT]</span></td></tr> | ||
[[Category: Kumar | </table> | ||
[[Category: | == Function == | ||
[[Category: Maindola | [https://www.uniprot.org/uniprot/DPS_ECOLI DPS_ECOLI] During stationary phase, binds the chromosome non-specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. Dps also protects the cell from UV and gamma irradiation, iron and copper toxicity, thermal stress and acid and base shocks. Also shows a weak catalase activity.<ref>PMID:1340475</ref> <ref>PMID:10403254</ref> <ref>PMID:15205421</ref> <ref>PMID:15534364</ref> | ||
[[Category: | == References == | ||
[[Category: | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Escherichia coli]] | ||
[[Category: Large Structures]] | |||
[[Category: Cai K]] | |||
[[Category: Kumar A]] | |||
[[Category: Larson MR]] | |||
[[Category: Maindola P]] | |||
[[Category: Montemayor EJ]] | |||
[[Category: Parrell D]] | |||
[[Category: Sibert BS]] | |||
[[Category: Wright ER]] | |||
[[Category: Yang JE]] | |||
Latest revision as of 07:31, 5 August 2026
Sub-tomogram averaged structure of E. Coli DNA protection during starvation protein (DPS)
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