9p3u: Difference between revisions

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<table><tr><td colspan='2'>[[9p3u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9P3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9P3U FirstGlance]. <br>
<table><tr><td colspan='2'>[[9p3u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9P3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9P3U FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1CG0:(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-6-[(2~{R})-2-(hydroxymethyl)-4-[(1~{R},2~{S},4~{S},5~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{S},16~{S},18~{S})-5,7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2-oxane]-16-yl]oxy-butoxy]-4,5-bis(oxidanyl)oxan-3-yl]oxy-oxane-3,4,5-triol'>A1CG0</scene>, <scene name='pdbligand=A1CGW:5-chloro-N-[(5-chloro-1,3-thiazol-2-yl)methyl]-1,2-benzothiazol-6-amine'>A1CGW</scene>, <scene name='pdbligand=A1CGZ:(1~{R},2~{S},4~{S},5~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{S},16~{S},18~{S})-5,7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2-oxane]-16-ol'>A1CGZ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1CG0:(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-6-[(2~{R})-2-(hydroxymethyl)-4-[(1~{R},2~{S},4~{S},5~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{S},16~{S},18~{S})-5,7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2-oxane]-16-yl]oxy-butoxy]-4,5-bis(oxidanyl)oxan-3-yl]oxy-oxane-3,4,5-triol'>A1CG0</scene>, <scene name='pdbligand=A1CGW:5-chloranyl-~{N}-[(5-chloranyl-1,3-thiazol-2-yl)methyl]-1,2-benzothiazol-6-amine'>A1CGW</scene>, <scene name='pdbligand=A1CGZ:(1~{R},2~{S},4~{S},5~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{S},16~{S},18~{S})-5,7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2-oxane]-16-ol'>A1CGZ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9p3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9p3u OCA], [https://pdbe.org/9p3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9p3u RCSB], [https://www.ebi.ac.uk/pdbsum/9p3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9p3u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9p3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9p3u OCA], [https://pdbe.org/9p3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9p3u RCSB], [https://www.ebi.ac.uk/pdbsum/9p3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9p3u ProSAT]</span></td></tr>
</table>
</table>

Revision as of 14:03, 10 February 2026

Zebrafish TRPM5 E337A mutant with 5mM calcium and 0.5mM CBTA

9p3u, resolution 2.75Å

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