9tao: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry~~ 9tao is ~~ON HOLD until 2027~~-~~11-18~~

==Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG==

~~Authors~~: ~~Beghiah~~, A., ~~Kovalova~~, T., ~~Kaila~~, V.R.I.

== Structural highlights ==

<table><tr><td colspan='2'>[[9tao]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BW25113 Escherichia coli BW25113]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9TAO OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9TAO FirstGlance].

~~Description~~: ~~Local refinement of E~~. ~~coli Complex I D79N NuoA mutant~~ membrane ~~domain~~ in ~~LMNG~~

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.61Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PE:1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>3PE</scene>, <scene name='pdbligand=7PH:(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+TETRADECANOATE'>7PH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=UQ8:UBIQUINONE-8'>UQ8</scene></td></tr>

[[Category: Beghiah, A]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9tao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9tao OCA], [https://pdbe.org/9tao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9tao RCSB], [https://www.ebi.ac.uk/pdbsum/9tao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9tao ProSAT]</td></tr>

[[Category: Kaila~~, V.R.I~~]]

</table>

[[Category: Kovalova, T]]

== Function ==

[https://www.uniprot.org/uniprot/NUOH_ECOLI NUOH_ECOLI] NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

__TOC__

</StructureSection>

[[Category: Escherichia coli BW25113]]

[[Category: Large Structures]]

[[Category: Beghiah A]]

[[Category: Kaila VRI]]

[[Category: Kovalova T]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9tao is ON HOLD  until 2027-11-18
+==Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG==
+<StructureSection load='9tao' size='340' side='right'caption='[[9tao]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
-Authors: Beghiah, A., Kovalova, T., Kaila, V.R.I.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9tao]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BW25113 Escherichia coli BW25113]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9TAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9TAO FirstGlance]. <br>
-Description: Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PE:1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>3PE</scene>, <scene name='pdbligand=7PH:(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+TETRADECANOATE'>7PH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=UQ8:UBIQUINONE-8'>UQ8</scene></td></tr>
-[[Category: Beghiah, A]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9tao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9tao OCA], [https://pdbe.org/9tao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9tao RCSB], [https://www.ebi.ac.uk/pdbsum/9tao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9tao ProSAT]</span></td></tr>
-[[Category: Kaila, V.R.I]]
+</table>
-[[Category: Kovalova, T]]
+== Function ==
+[https://www.uniprot.org/uniprot/NUOH_ECOLI NUOH_ECOLI] NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
+__TOC__
+</StructureSection>
+[[Category: Escherichia coli BW25113]]
+[[Category: Large Structures]]
+[[Category: Beghiah A]]
+[[Category: Kaila VRI]]
+[[Category: Kovalova T]]