28iy: Difference between revisions

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'''Unreleased structure'''


The entry 28iy is ON HOLD  until Paper Publication
==Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1 at 2.13 Angstrom resolution==
<StructureSection load='28iy' size='340' side='right'caption='[[28iy]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[28iy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lama_glama Lama glama] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=28IY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=28IY FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.129&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=28iy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=28iy OCA], [https://pdbe.org/28iy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=28iy RCSB], [https://www.ebi.ac.uk/pdbsum/28iy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=28iy ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5UE59_MOUSE Q5UE59_MOUSE] [https://www.uniprot.org/uniprot/A0A9J7H4Y6_CRIGR A0A9J7H4Y6_CRIGR]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
BACKGROUND: Although de novo causation in dystonia is widely acknowledged, there have been only a few trio-sequencing analyses in this field. We sought to prioritise de novo variants in dystonia and characterise the clinical and molecular features associated with the top gene candidate identified after genomic matchmaking. METHODS: We (re)assessed exome-sequencing data for de novo variants in genes with strong mutational constraint in a sample of 257 dystonia trios. Via data sharing, we collected information on individuals with variants in KLC1, encoding a subunit of the axonal-transport motor protein kinesin-1. Biophysical, biochemical, and functional studies, including differential scanning fluorimetry, X-ray crystallography, fluorescence-polarisation measurements, and immunoprecipitation from cells were performed for representative KLC1 variants. FINDINGS: Missense and loss-of-function de novo variants in constrained genes without implication in autosomal dominant or X-linked conditions were found in 11.7% (30/257) of cases with dystonia. We then ascertained 7 unrelated patients with movement and neurodevelopmental disorders who harboured distinct, predicted deleterious de novo KLC1 missense variants. These variants clustered within the cargo adaptor-binding tetratricopeptide repeat domain and 3 variants mapped to an identical amino-acid position. Highly similar infantile-onset dystonic-spastic phenotypes were observed in the subjects with the recurrently affected residue. For all functionally tested variants, we observed changes in KLC1 stability and/or altered binding behaviour to known kinesin-1 interactors, such as JIP3, previously associated with dystonia and neurodevelopmental impairment. INTERPRETATION: Our research supports the existence of a kinesinopathy linked to KLC1, featuring phenotypic overlap with diseases related to mutational defects of key interactors of KLC1. The full dystonia de-novo variant compendium is reported as a resource for additional disease-gene discovery. FUNDING: Else Kroner-Fresenius-Stiftung, German Federal Ministry of Education and Research, Technical University of Munich-Institute for Advanced Study, EU Renewal and Resilience Plan, Czech Ministry of Health, European Union-Next Generation EU, Italian Ministry for Universities and Research.


Authors:  
Trio analysis in dystonia identifies de novo KLC1 variants in a kinesinopathy with distinct motor and neurodevelopmental features.,Peirano E, O'Regan L, Harrer P, Dzinovic I, Chegkazi MS, Havrankova P, Brunet T, Capolino R, Cesario C, Ferro S, Hammar E, Ha-Vinh Leuchter R, Indelicato E, Jacob M, Kunc L, Margot H, Marin O, Mazurkiewicz-Beldzinska M, Mencacci NE, Novelli A, Orec L, Poschmann M, Sitzberger A, Sorrentino U, Spanjaard M, Wagner M, Krygier M, Boesch S, Necpal J, Skorvanek M, Gilbert DL, Jech R, Dodding M, Steiner RA, Zech M EBioMedicine. 2026 Jul;129:106358. doi: 10.1016/j.ebiom.2026.106358. Epub 2026 , Jun 29. PMID:42372486<ref>PMID:42372486</ref>


Description:  
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
<div class="pdbe-citations 28iy" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Lama glama]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Chegkazi MS]]
[[Category: Peirano E]]
[[Category: Steiner RA]]

Latest revision as of 16:15, 25 September 2026

Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1 at 2.13 Angstrom resolution

28iy, resolution 2.13Å

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