AlphaFold: Difference between revisions
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* If a prediction is already in the [[#AlphaFold Database of Predictions|AlphaFold Database]], simply download it. Limited to single chain proteins without ligands. | * If a prediction is already in the [[#AlphaFold Database of Predictions|AlphaFold Database]], simply download it. Limited to single chain proteins without ligands. | ||
* Otherwise, and for multiple chain (protein/nucleic acid) structures with ligands, follow [[How to predict structures with AlphaFold]]. | * Otherwise, and for multiple chain (protein/nucleic acid) structures with ligands, follow [[How to predict structures with AlphaFold]]. | ||
* Dropping the predicted model into [http://FirstGlance.Jmol.Org FirstGlance in Jmol] will automatically '''color it by estimated reliability per residue'''. Examples: [http://bioinformatics.org/molvis/images/firstglance-with-alphafold.png Snapshot], [ | * Dropping the predicted model into [http://FirstGlance.Jmol.Org FirstGlance in Jmol] will automatically '''color it by estimated reliability per residue'''. Examples: [http://bioinformatics.org/molvis/images/firstglance-with-alphafold.png Snapshot], [https://molviz.org/firstglance/fgij/fg.htm?mol=AF-Q9AY27-F1-model_v1.pdb Interactive]. | ||
</td></tr></table> | </td></tr></table> | ||
