1yv8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
Line 1: Line 1:
[[Image:1yv8.gif|left|200px]]
{{Seed}}
[[Image:1yv8.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1yv8|  PDB=1yv8  |  SCENE=  }}  
{{STRUCTURE_1yv8|  PDB=1yv8  |  SCENE=  }}  


'''Solution structure of crambin in acetone/water mixed solvent'''
===Solution structure of crambin in acetone/water mixed solvent===




==Overview==
<!--
We chose crambin, a hydrophobic and water-insoluble protein originally isolated from the seeds of the plant Crambe abyssinica, as a model for NMR investigations of membrane-associated proteins. We produced isotopically labeled crambin(P22,L25) (variant of crambin containing Pro22 and Leu25) as a cleavable fusion with staphylococcal nuclease and refolded the protein by an approach that has proved successful for the production of proteins with multiple disulfide bonds. We used NMR spectroscopy to determine the three-dimensional structure of the protein in two membrane-mimetic environments: in a mixed aqueous-organic solvent (75%/25%, acetone/water) and in DPC micelles. With the sample in the mixed solvent, it was possible to determine (&gt;NH...OC&lt;) hydrogen bonds directly by the detection of (h3)J(NC)' couplings. H-bonds determined in this manner were utilized in the refinement of the NMR-derived protein structures. With the protein in DPC (dodecylphosphocholine) micelles, we used manganous ion as an aqueous paramagnetic probe to determine the surface of crambin that is shielded by the detergent. With the exception of the aqueous solvent exposed loop containing residues 20 and 21, the protein surface was protected by DPC. This suggests that the protein may be similarly embedded in physiological membranes. The strategy described here for the expression and structure determination of crambin should be applicable to structural and functional studies of membrane active toxins and small membrane proteins.
The line below this paragraph, {{ABSTRACT_PUBMED_16569017}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 16569017 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_16569017}}


==About this Structure==
==About this Structure==
1YV8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YV8 OCA].  
1YV8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YV8 OCA].  


==Reference==
==Reference==
Line 26: Line 30:
[[Category: Crambin]]
[[Category: Crambin]]
[[Category: Mixed organic/aqueous solvent]]
[[Category: Mixed organic/aqueous solvent]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 16:49:50 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 12:59:17 2008''

Revision as of 09:59, 29 July 2008

File:1yv8.png

Template:STRUCTURE 1yv8

Solution structure of crambin in acetone/water mixed solvent

Template:ABSTRACT PUBMED 16569017

About this Structure

1YV8 is a Single protein structure of sequence from Crambe hispanica subsp. abyssinica. Full experimental information is available from OCA.

Reference

Three-dimensional structure of the water-insoluble protein crambin in dodecylphosphocholine micelles and its minimal solvent-exposed surface., Ahn HC, Juranic N, Macura S, Markley JL, J Am Chem Soc. 2006 Apr 5;128(13):4398-404. PMID:16569017

Page seeded by OCA on Tue Jul 29 12:59:17 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1yv8&oldid=742209"