2hwn: Difference between revisions

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[[Image:2hwn.gif|left|200px]]
{{Seed}}
[[Image:2hwn.png|left|200px]]


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{{STRUCTURE_2hwn|  PDB=2hwn  |  SCENE=  }}  
{{STRUCTURE_2hwn|  PDB=2hwn  |  SCENE=  }}  


'''Crystal Structure of RII alpha Dimerization/Docking domain of PKA bound to the D-AKAP2 peptide'''
===Crystal Structure of RII alpha Dimerization/Docking domain of PKA bound to the D-AKAP2 peptide===




==Overview==
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A kinase-anchoring proteins (AKAPs) target PKA to specific microdomains by using an amphipathic helix that docks to N-terminal dimerization and docking (D/D) domains of PKA regulatory (R) subunits. To understand specificity, we solved the crystal structure of the helical motif from D-AKAP2, a dual-specific AKAP, bound to the RIIalpha D/D domain. The 1.6 Angstrom structure reveals how this dynamic, hydrophobic docking site is assembled. A stable, hydrophobic docking groove is formed by the helical interface of two RIIalpha protomers. The flexible N terminus of one protomer is then recruited to the site, anchored to the peptide through two essential isoleucines. The other N terminus is disordered. This asymmetry provides greater possibilities for AKAP docking. Although there is strong discrimination against RIalpha in the N terminus of the AKAP helix, the hydrophobic groove discriminates against RIIalpha. RIalpha, with a cavity in the groove, can accept a bulky tryptophan, whereas RIIalpha requires valine.
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{{ABSTRACT_PUBMED_17081990}}


==About this Structure==
==About this Structure==
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[[Category: Pka]]
[[Category: Pka]]
[[Category: Regulatory subunit]]
[[Category: Regulatory subunit]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 06:48:10 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 05:05:03 2008''

Revision as of 02:05, 28 July 2008

File:2hwn.png

Template:STRUCTURE 2hwn

Crystal Structure of RII alpha Dimerization/Docking domain of PKA bound to the D-AKAP2 peptide

Template:ABSTRACT PUBMED 17081990

About this Structure

2HWN is a Single protein structure of sequence from Rattus norvegicus. Full crystallographic information is available from OCA.

Reference

A dynamic mechanism for AKAP binding to RII isoforms of cAMP-dependent protein kinase., Kinderman FS, Kim C, von Daake S, Ma Y, Pham BQ, Spraggon G, Xuong NH, Jennings PA, Taylor SS, Mol Cell. 2006 Nov 3;24(3):397-408. PMID:17081990

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