2i5z: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:2i5z.jpg|left|200px]]
{{Seed}}
[[Image:2i5z.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2i5z|  PDB=2i5z  |  SCENE=  }}  
{{STRUCTURE_2i5z|  PDB=2i5z  |  SCENE=  }}  


'''The crystal structure of OspA mutant'''
===The crystal structure of OspA mutant===




==Overview==
<!--  
Formation of a flat beta-sheet is a fundamental event in beta-sheet-mediated protein self-assembly. To investigate the contributions of various factors to the stability of flat beta-sheets, we performed extensive alanine-scanning mutagenesis experiments on the single-layer beta-sheet segment of Borrelia outer surface protein A (OspA). This beta-sheet segment consists of beta-strands with highly regular geometries that can serve as a building block for self-assembly. Our Ala-scanning approach is distinct from the conventional host-guest method, in that it introduces only conservative, truncation mutations that should minimize structural perturbation. Our results showed very weak correlation with experimental beta-sheet propensity scales, statistical beta-sheet propensity scales, or cross-strand pairwise correlations. In contrast, our data showed strong positive correlation with the change in buried non-polar surface area. Polar interactions including prominent Glu-Lys cross-strand pairs contribute marginally to the beta-sheet stability. These results were corroborated by results from additional non-Ala mutations. Taken together, these results demonstrate the dominant contribution of non-polar surface burial to flat beta-sheet stability even at solvent-exposed positions. The OspA single-layer beta-sheet achieves efficient hydrophobic surface burial without forming a hydrophobic core by a strategic placement of a variety of side-chains. These findings further suggest the importance of hydrophobic interactions within a beta-sheet layer in peptide self-assembly.
The line below this paragraph, {{ABSTRACT_PUBMED_17335845}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 17335845 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_17335845}}


==About this Structure==
==About this Structure==
Line 26: Line 30:
[[Category: Terechko, V.]]
[[Category: Terechko, V.]]
[[Category: Beta-sheet]]
[[Category: Beta-sheet]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 07:07:10 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 15:45:39 2008''