1b73: Difference between revisions

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New page: left|200px<br /><applet load="1b73" size="450" color="white" frame="true" align="right" spinBox="true" caption="1b73, resolution 2.3Å" /> '''GLUTAMATE RACEMASE FR...
 
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[[Image:1b73.jpg|left|200px]]<br /><applet load="1b73" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1b73.jpg|left|200px]]<br /><applet load="1b73" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1b73, resolution 2.3&Aring;" />
caption="1b73, resolution 2.3&Aring;" />
'''GLUTAMATE RACEMASE FROM AQUIFEX PYROPHILUS'''<br />
'''GLUTAMATE RACEMASE FROM AQUIFEX PYROPHILUS'''<br />


==Overview==
==Overview==
Glutamate racemase (MurI) is responsible for the synthesis of D-glutamate, an essential building block of the peptidoglycan layer in bacterial cell, walls. The crystal structure of glutamate racemase from Aquifex, pyrophilus, determined at 2.3 A resolution, reveals that the enzyme forms, a dimer and each monomer consists of two alpha/beta fold domains, a unique, structure that has not been observed in other racemases or members of an, enolase superfamily. A substrate analog, D-glutamine, binds to the deep, pocket formed by conserved residues from two monomers. The structural and, mutational analyses allow us to propose a mechanism of metal, cofactor-independent glutamate racemase in which two cysteine residues are, involved in catalysis.
Glutamate racemase (MurI) is responsible for the synthesis of D-glutamate, an essential building block of the peptidoglycan layer in bacterial cell walls. The crystal structure of glutamate racemase from Aquifex pyrophilus, determined at 2.3 A resolution, reveals that the enzyme forms a dimer and each monomer consists of two alpha/beta fold domains, a unique structure that has not been observed in other racemases or members of an enolase superfamily. A substrate analog, D-glutamine, binds to the deep pocket formed by conserved residues from two monomers. The structural and mutational analyses allow us to propose a mechanism of metal cofactor-independent glutamate racemase in which two cysteine residues are involved in catalysis.


==About this Structure==
==About this Structure==
1B73 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_pyrophilus Aquifex pyrophilus]. Active as [http://en.wikipedia.org/wiki/Glutamate_racemase Glutamate racemase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.3 5.1.1.3] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1B73 OCA].  
1B73 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_pyrophilus Aquifex pyrophilus]. Active as [http://en.wikipedia.org/wiki/Glutamate_racemase Glutamate racemase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.3 5.1.1.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B73 OCA].  


==Reference==
==Reference==
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[[Category: Glutamate racemase]]
[[Category: Glutamate racemase]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Cho, C.S.]]
[[Category: Cho, C S.]]
[[Category: Cho, Y.]]
[[Category: Cho, Y.]]
[[Category: Hwang, K.Y.]]
[[Category: Hwang, K Y.]]
[[Category: Kim, S.S.]]
[[Category: Kim, S S.]]
[[Category: Yu, Y.G.]]
[[Category: Yu, Y G.]]
[[Category: isomerase]]
[[Category: isomerase]]
[[Category: racemase]]
[[Category: racemase]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 11:25:00 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:52:20 2008''