1zmo: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1zmo.gif|left|200px]]
{{Seed}}
[[Image:1zmo.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1zmo|  PDB=1zmo  |  SCENE=  }}  
{{STRUCTURE_1zmo|  PDB=1zmo  |  SCENE=  }}  


'''Apo structure of haloalcohol dehalogenase HheA of Arthrobacter sp. AD2'''
===Apo structure of haloalcohol dehalogenase HheA of Arthrobacter sp. AD2===




==Overview==
<!--  
Haloalcohol dehalogenases are bacterial enzymes that cleave the carbon-halogen bond in short aliphatic vicinal haloalcohols, like 1-chloro-2,3-propanediol, some of which are recalcitrant environmental pollutants. They use a conserved Ser-Tyr-Arg catalytic triad to deprotonate the haloalcohol oxygen, which attacks the halogen-bearing carbon atom, producing an epoxide and a halide ion. Here, we present the X-ray structure of the haloalcohol dehalogenase HheA(AD2) from Arthrobacter sp. strain AD2 at 2.0-A resolution. Comparison with the previously reported structure of the 34% identical enantioselective haloalcohol dehalogenase HheC from Agrobacterium radiobacter AD1 shows that HheA(AD2) has a similar quaternary and tertiary structure but a much more open substrate-binding pocket. Docking experiments reveal that HheA(AD2) can bind both enantiomers of the haloalcohol substrate 1-p-nitrophenyl-2-chloroethanol in a productive way, which explains the low enantiopreference of HheA(AD2). Other differences are found in the halide-binding site, where the side chain amino group of Asn182 is in a position to stabilize the halogen atom or halide ion in HheA(AD2), in contrast to HheC, where a water molecule has taken over this role. These results broaden the insight into the structural determinants that govern reactivity and selectivity in the haloalcohol dehalogenase family.
The line below this paragraph, {{ABSTRACT_PUBMED_16707696}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 16707696 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_16707696}}


==About this Structure==
==About this Structure==
Line 31: Line 35:
[[Category: Lyase]]
[[Category: Lyase]]
[[Category: Short-chain dehydrogenase/reductase family]]
[[Category: Short-chain dehydrogenase/reductase family]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 14 11:36:25 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 15:45:10 2008''