2jt0: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Newer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
New page: left|200px <!-- The line below this paragraph, containing "STRUCTURE_2jt0", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
Line 1: Line 1:
[[Image:2jt0.jpg|left|200px]]
{{Seed}}
[[Image:2jt0.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2jt0|  PDB=2jt0  |  SCENE=  }}  
{{STRUCTURE_2jt0|  PDB=2jt0  |  SCENE=  }}  


'''Solution structure of F104W cardiac troponin C'''
===Solution structure of F104W cardiac troponin C===




==Overview==
<!--
19F NMR spectroscopy is potentially a powerful tool for probing protein properties in situ. However, results obtained using this technique are relevant only if the 19F probe offers minimal perturbation to the surrounding environment. In this paper, we examine the effect of 5-fluorotryptophan (5fW) incorporation on the three-dimensional structure of cardiac troponin-C (cTnC), with the intention of developing a 19F-labeled TnC for use in in situ 19FNMR. We find that, in general, 5fW does not perturb the structure of the protein significantly. Replacement of residue Phe 153 with 5fW produces no noticeable change in protein conformation. However, replacement of residue Phe 104 with 5fW produces a folding behavior that is dependent on the Escherichia coli strain used to express the mutant. The orientations of the indole rings in these mutants are such that the Trp residue adopts a chi2 of approximately 90 degrees in the F104W mutant and approximately -100 degrees in the F153W mutant. Using results from 19F-1H heteronuclear NOE experiment, we show the replacement of L-Trp with 5fW at these positions does not change the orientation of the indole ring and the spread of the 5fW side-chain dihedral angles increases moderately for the F104(5fW) mutant and not at all for the F153(5fW) mutant. Based on these structures, we conclude that the substitution of Phe by 5fW at these two positions has minimal effects on the structure of cTnC and that the 5fW indole rings in both mutants have well defined orientation, making the two mutants viable candidates for use in in situ 19F NMR spectroscopy.
The line below this paragraph, {{ABSTRACT_PUBMED_16131667}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 16131667 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_16131667}}


==About this Structure==
==About this Structure==
2JT0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JT0 OCA].  
2JT0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JT0 OCA].  


==Reference==
==Reference==
Line 33: Line 37:
[[Category: Phe-to-trp mutation]]
[[Category: Phe-to-trp mutation]]
[[Category: Polymorphism]]
[[Category: Polymorphism]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 28 09:12:02 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 17:01:36 2008''

Revision as of 14:01, 27 July 2008

File:2jt0.png

Template:STRUCTURE 2jt0

Solution structure of F104W cardiac troponin C

Template:ABSTRACT PUBMED 16131667

About this Structure

2JT0 is a Single protein structure of sequence from Homo sapiens. Full experimental information is available from OCA.

Reference

Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies., Wang X, Mercier P, Letourneau PJ, Sykes BD, Protein Sci. 2005 Sep;14(9):2447-60. PMID:16131667

Page seeded by OCA on Sun Jul 27 17:01:36 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2jt0&oldid=657162"