1k2w: Difference between revisions

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New page: left|200px<br /><applet load="1k2w" size="450" color="white" frame="true" align="right" spinBox="true" caption="1k2w, resolution 2.4Å" /> '''Crystal structure of ...
 
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[[Image:1k2w.jpg|left|200px]]<br /><applet load="1k2w" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1k2w.jpg|left|200px]]<br /><applet load="1k2w" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1k2w, resolution 2.4&Aring;" />
caption="1k2w, resolution 2.4&Aring;" />
'''Crystal structure of sorbitol dehydrogenase from R. sphaeroides'''<br />
'''Crystal structure of sorbitol dehydrogenase from R. sphaeroides'''<br />


==Overview==
==Overview==
Recombinant sorbitol dehydrogenase (SDH) from Rhodobacter sphaeroides has, been crystallized in the absence of the cofactor NAD(H) and its structure, determined to 2.4 A resolution using molecular replacement (refined R and, R free factors of 18.8 and 23.8%, respectively). As expected from the, sequence and shown by the conserved fold, SDH can be assigned to the, short-chain dehydrogenase/reductase protein family. The cofactor NAD and, the substrate sorbitol have been modelled into the structure and the, active-site architecture, which displays the highly conserved catalytic, tetrad of Asn-Ser-Tyr-Lys residues, is discussed in relation to the enzyme, mechanism. This is the first structure of a bacterial SDH belonging to the, SDR family.
Recombinant sorbitol dehydrogenase (SDH) from Rhodobacter sphaeroides has been crystallized in the absence of the cofactor NAD(H) and its structure determined to 2.4 A resolution using molecular replacement (refined R and R free factors of 18.8 and 23.8%, respectively). As expected from the sequence and shown by the conserved fold, SDH can be assigned to the short-chain dehydrogenase/reductase protein family. The cofactor NAD and the substrate sorbitol have been modelled into the structure and the active-site architecture, which displays the highly conserved catalytic tetrad of Asn-Ser-Tyr-Lys residues, is discussed in relation to the enzyme mechanism. This is the first structure of a bacterial SDH belonging to the SDR family.


==About this Structure==
==About this Structure==
1K2W is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Active as [http://en.wikipedia.org/wiki/L-iditol_2-dehydrogenase L-iditol 2-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.14 1.1.1.14] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1K2W OCA].  
1K2W is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Active as [http://en.wikipedia.org/wiki/L-iditol_2-dehydrogenase L-iditol 2-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.14 1.1.1.14] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K2W OCA].  


==Reference==
==Reference==
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[[Category: short-chain dehydrogenase]]
[[Category: short-chain dehydrogenase]]


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