1lkb: Difference between revisions

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New page: left|200px<br /><applet load="1lkb" size="450" color="white" frame="true" align="right" spinBox="true" caption="1lkb, resolution 1.70Å" /> '''Porcine Pancreatic E...
 
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[[Image:1lkb.jpg|left|200px]]<br /><applet load="1lkb" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1lkb.jpg|left|200px]]<br /><applet load="1lkb" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1lkb, resolution 1.70&Aring;" />
caption="1lkb, resolution 1.70&Aring;" />
'''Porcine Pancreatic Elastase/Na-Complex'''<br />
'''Porcine Pancreatic Elastase/Na-Complex'''<br />


==Overview==
==Overview==
Porcine pancreatic elastase has been crystallized at slightly acidic pH, under two similar but slightly different conditions. Diffraction data were, collected at a wavelength of 1.5 A to a maximum resolution of 1.7 A. Both, difference electron-density maps and anomalous difference electron-density, maps suggest that in crystals grown from a sodium sulfate solution PPE, binds Na(+) in its metal-binding site. In contrast, PPE binds Ca(2+) in, crystals grown from a solution containing sodium citrate and calcium, chloride. This observation is in contradiction to most PPE structures, reported in the PDB. In addition to the metal-binding site, up to three, other binding sites, which appear to be anion-binding sites, could be, identified based on the observed anomalous intensity differences.
Porcine pancreatic elastase has been crystallized at slightly acidic pH under two similar but slightly different conditions. Diffraction data were collected at a wavelength of 1.5 A to a maximum resolution of 1.7 A. Both difference electron-density maps and anomalous difference electron-density maps suggest that in crystals grown from a sodium sulfate solution PPE binds Na(+) in its metal-binding site. In contrast, PPE binds Ca(2+) in crystals grown from a solution containing sodium citrate and calcium chloride. This observation is in contradiction to most PPE structures reported in the PDB. In addition to the metal-binding site, up to three other binding sites, which appear to be anion-binding sites, could be identified based on the observed anomalous intensity differences.


==About this Structure==
==About this Structure==
1LKB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa] with SO4, CL and NA as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Pancreatic_elastase Pancreatic elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.36 3.4.21.36] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1LKB OCA].  
1LKB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=NA:'>NA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Pancreatic_elastase Pancreatic elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.36 3.4.21.36] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKB OCA].  


==Reference==
==Reference==
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[[Category: Nowak, E.]]
[[Category: Nowak, E.]]
[[Category: Panjikar, S.]]
[[Category: Panjikar, S.]]
[[Category: Tucker, P.A.]]
[[Category: Tucker, P A.]]
[[Category: Weiss, M.S.]]
[[Category: Weiss, M S.]]
[[Category: CL]]
[[Category: CL]]
[[Category: NA]]
[[Category: NA]]
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[[Category: sulfate binding]]
[[Category: sulfate binding]]


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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:45:43 2008''