1t8k: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px<br /><applet load="1t8k" size="450" color="white" frame="true" align="right" spinBox="true" caption="1t8k, resolution 1.10Å" /> '''Crystal Structure of...
 
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1t8k.jpg|left|200px]]<br /><applet load="1t8k" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1t8k.jpg|left|200px]]<br /><applet load="1t8k" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1t8k, resolution 1.10&Aring;" />
caption="1t8k, resolution 1.10&Aring;" />
'''Crystal Structure of apo acyl carrier protein from E. coli'''<br />
'''Crystal Structure of apo acyl carrier protein from E. coli'''<br />


==Overview==
==Overview==
A topic of current interest is engineering surface mutations in order to, improve the success rate of protein crystallization. This report explores, the possibility of using metal-ion-mediated crystal-packing interactions, to facilitate rational design. Escherichia coli apo acyl carrier protein, was chosen as a test case because of its high content of negatively, charged carboxylates suitable for metal binding with moderate affinity., The protein was successfully crystallized in the presence of zinc ions., The crystal structure was determined to 1.1 A resolution with MAD phasing, using anomalous signals from the co-crystallized Zn(2+) ions. The case, study suggested an integrated strategy for crystallization and structure, solution of proteins via engineering surface Asp and Glu mutants, crystallizing them in the presence of metal ions such as Zn(2+) and, solving the structures using anomalous signals.
A topic of current interest is engineering surface mutations in order to improve the success rate of protein crystallization. This report explores the possibility of using metal-ion-mediated crystal-packing interactions to facilitate rational design. Escherichia coli apo acyl carrier protein was chosen as a test case because of its high content of negatively charged carboxylates suitable for metal binding with moderate affinity. The protein was successfully crystallized in the presence of zinc ions. The crystal structure was determined to 1.1 A resolution with MAD phasing using anomalous signals from the co-crystallized Zn(2+) ions. The case study suggested an integrated strategy for crystallization and structure solution of proteins via engineering surface Asp and Glu mutants, crystallizing them in the presence of metal ions such as Zn(2+) and solving the structures using anomalous signals.


==About this Structure==
==About this Structure==
1T8K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with ZN and IMD as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1T8K OCA].  
1T8K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=IMD:'>IMD</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T8K OCA].  


==Reference==
==Reference==
Line 13: Line 13:
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Janson, C.A.]]
[[Category: Janson, C A.]]
[[Category: Qiu, X.]]
[[Category: Qiu, X.]]
[[Category: IMD]]
[[Category: IMD]]
Line 19: Line 19:
[[Category: acp]]
[[Category: acp]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:04:15 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:11:03 2008''