1tuk: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="1tuk" size="450" color="white" frame="true" align="right" spinBox="true" caption="1tuk, resolution 1.12Å" /> '''Crystal stucture of ... |
No edit summary |
||
| Line 1: | Line 1: | ||
[[Image:1tuk.gif|left|200px]]<br /><applet load="1tuk" size=" | [[Image:1tuk.gif|left|200px]]<br /><applet load="1tuk" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1tuk, resolution 1.12Å" /> | caption="1tuk, resolution 1.12Å" /> | ||
'''Crystal stucture of liganted type 2 non specific lipid transfer protein from wheat'''<br /> | '''Crystal stucture of liganted type 2 non specific lipid transfer protein from wheat'''<br /> | ||
==Overview== | ==Overview== | ||
In plants, a family of ubiquitous proteins named non-specific | In plants, a family of ubiquitous proteins named non-specific lipid-transfer proteins (ns-LTPs) facilitates the transfer of fatty acids, phospholipids and steroids between membranes. Recent data suggest that these secreted proteins play a key role in the formation of cuticular wax layers and in defence mechanisms against pathogens. In this study, X-ray crystallography has been used to examine the structural details of the interaction between a wheat type 2 ns-LTP and a lipid, L-alpha-palmitoyl-phosphatidyl glycerol. This crystal structure was solved ab initio at 1.12 A resolution by direct methods. The typical alpha-helical bundle fold of this protein is maintained by four disulfide bridges and delineates two hydrophobic cavities. The inner surface of the main cavity is lined by non-polar residues that provide a hydrophobic environment for the palmitoyl moiety of the lipid. The head-group region of this lipid protrudes from the surface and makes several polar interactions with a conserved patch of basic residues at the entrance of the pocket. The alkyl chain of a second lipid is bound within an adjacent smaller cavity. The structure shows that binding of the lipid tails to the protein involves extensive hydrophobic interactions. | ||
==About this Structure== | ==About this Structure== | ||
1TUK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum] with IOD and PGM as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http:// | 1TUK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum] with <scene name='pdbligand=IOD:'>IOD</scene> and <scene name='pdbligand=PGM:'>PGM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TUK OCA]. | ||
==Reference== | ==Reference== | ||
| Line 14: | Line 14: | ||
[[Category: Triticum aestivum]] | [[Category: Triticum aestivum]] | ||
[[Category: Dumas, C.]] | [[Category: Dumas, C.]] | ||
[[Category: Gautier, M | [[Category: Gautier, M F.]] | ||
[[Category: Hoh, F.]] | [[Category: Hoh, F.]] | ||
[[Category: Lamotte, F | [[Category: Lamotte, F De.]] | ||
[[Category: Pons, J | [[Category: Pons, J L.]] | ||
[[Category: IOD]] | [[Category: IOD]] | ||
[[Category: PGM]] | [[Category: PGM]] | ||
| Line 23: | Line 23: | ||
[[Category: ns-ltp2]] | [[Category: ns-ltp2]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:17:34 2008'' | ||