1tuk: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px<br /><applet load="1tuk" size="450" color="white" frame="true" align="right" spinBox="true" caption="1tuk, resolution 1.12Å" /> '''Crystal stucture of ...
 
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1tuk.gif|left|200px]]<br /><applet load="1tuk" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1tuk.gif|left|200px]]<br /><applet load="1tuk" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1tuk, resolution 1.12&Aring;" />
caption="1tuk, resolution 1.12&Aring;" />
'''Crystal stucture of liganted type 2 non specific lipid transfer protein from wheat'''<br />
'''Crystal stucture of liganted type 2 non specific lipid transfer protein from wheat'''<br />


==Overview==
==Overview==
In plants, a family of ubiquitous proteins named non-specific, lipid-transfer proteins (ns-LTPs) facilitates the transfer of fatty acids, phospholipids and steroids between membranes. Recent data suggest that, these secreted proteins play a key role in the formation of cuticular wax, layers and in defence mechanisms against pathogens. In this study, X-ray, crystallography has been used to examine the structural details of the, interaction between a wheat type 2 ns-LTP and a lipid, L-alpha-palmitoyl-phosphatidyl glycerol. This crystal structure was solved, ab initio at 1.12 A resolution by direct methods. The typical, alpha-helical bundle fold of this protein is maintained by four disulfide, bridges and delineates two hydrophobic cavities. The inner surface of the, main cavity is lined by non-polar residues that provide a hydrophobic, environment for the palmitoyl moiety of the lipid. The head-group region, of this lipid protrudes from the surface and makes several polar, interactions with a conserved patch of basic residues at the entrance of, the pocket. The alkyl chain of a second lipid is bound within an adjacent, smaller cavity. The structure shows that binding of the lipid tails to the, protein involves extensive hydrophobic interactions.
In plants, a family of ubiquitous proteins named non-specific lipid-transfer proteins (ns-LTPs) facilitates the transfer of fatty acids, phospholipids and steroids between membranes. Recent data suggest that these secreted proteins play a key role in the formation of cuticular wax layers and in defence mechanisms against pathogens. In this study, X-ray crystallography has been used to examine the structural details of the interaction between a wheat type 2 ns-LTP and a lipid, L-alpha-palmitoyl-phosphatidyl glycerol. This crystal structure was solved ab initio at 1.12 A resolution by direct methods. The typical alpha-helical bundle fold of this protein is maintained by four disulfide bridges and delineates two hydrophobic cavities. The inner surface of the main cavity is lined by non-polar residues that provide a hydrophobic environment for the palmitoyl moiety of the lipid. The head-group region of this lipid protrudes from the surface and makes several polar interactions with a conserved patch of basic residues at the entrance of the pocket. The alkyl chain of a second lipid is bound within an adjacent smaller cavity. The structure shows that binding of the lipid tails to the protein involves extensive hydrophobic interactions.


==About this Structure==
==About this Structure==
1TUK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum] with IOD and PGM as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1TUK OCA].  
1TUK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum] with <scene name='pdbligand=IOD:'>IOD</scene> and <scene name='pdbligand=PGM:'>PGM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TUK OCA].  


==Reference==
==Reference==
Line 14: Line 14:
[[Category: Triticum aestivum]]
[[Category: Triticum aestivum]]
[[Category: Dumas, C.]]
[[Category: Dumas, C.]]
[[Category: Gautier, M.F.]]
[[Category: Gautier, M F.]]
[[Category: Hoh, F.]]
[[Category: Hoh, F.]]
[[Category: Lamotte, F.De.]]
[[Category: Lamotte, F De.]]
[[Category: Pons, J.L.]]
[[Category: Pons, J L.]]
[[Category: IOD]]
[[Category: IOD]]
[[Category: PGM]]
[[Category: PGM]]
Line 23: Line 23:
[[Category: ns-ltp2]]
[[Category: ns-ltp2]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:36:12 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:17:34 2008''