1wmg: Difference between revisions
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New page: left|200px<br /><applet load="1wmg" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wmg, resolution 2.10Å" /> '''Crystal structure of... |
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[[Image:1wmg.gif|left|200px]]<br /><applet load="1wmg" size=" | [[Image:1wmg.gif|left|200px]]<br /><applet load="1wmg" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1wmg, resolution 2.10Å" /> | caption="1wmg, resolution 2.10Å" /> | ||
'''Crystal structure of the UNC5H2 death domain'''<br /> | '''Crystal structure of the UNC5H2 death domain'''<br /> | ||
==Overview== | ==Overview== | ||
UNC5Hs (UNC5H1-4) are netrin 1 receptors that are involved in axonal | UNC5Hs (UNC5H1-4) are netrin 1 receptors that are involved in axonal guidance and neuronal migration. They are dependence receptors that mediate apoptosis in the absence of netrin 1. UNC5H2-induced apoptosis depends on the interaction of the death domain at the C-terminus with the DAP-kinase death domain and caspase cleavage near the transmembrane region. Here, the crystal structure of the mouse UNC5H2 death domain has been determined at 2.1 A resolution. The domain adopts a six-helix bundle fold, which is similar to those of the other members of the death-domain superfamily. The UNC5H2 death domain is a dimer in the crystal and in solution. This homodimerized structure may represent the structure of the death domain when netrin 1 binds to the UNC5H2 receptor. Homodimerization of UNC5H2 may block the access of caspase to the cleavage site. In the death-domain dimer, residues in alpha3 and the 3(10)-helix preceding alpha3 and the residues in alpha4 make significant contacts, mainly by hydrophobic and van der Waals interactions. | ||
==About this Structure== | ==About this Structure== | ||
1WMG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] with SO3 and SO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http:// | 1WMG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] with <scene name='pdbligand=SO3:'>SO3</scene> and <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMG OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: Handa, N.]] | [[Category: Handa, N.]] | ||
[[Category: Murayama, K.]] | [[Category: Murayama, K.]] | ||
[[Category: RSGI, RIKEN | [[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]] | ||
[[Category: Shirouzu, M.]] | [[Category: Shirouzu, M.]] | ||
[[Category: Yokoyama, S.]] | [[Category: Yokoyama, S.]] | ||
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[[Category: structural genomics]] | [[Category: structural genomics]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:46:01 2008'' | ||