Proteopedia:Problems: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eran Hodis (talk | contribs) No edit summary |
Eran Hodis (talk | contribs) No edit summary |
||
| Line 3: | Line 3: | ||
When a problem below has been fixed, please prefix it with "Fixed (date):", rather than deleting it from this page. In this way everyone knows what problems have been fixed and when. | When a problem below has been fixed, please prefix it with "Fixed (date):", rather than deleting it from this page. In this way everyone knows what problems have been fixed and when. | ||
==Problems | ==Problems, more urgent== | ||
<span style="background-color:yellow;color:green">'''SOLVED'''</span> Green links need to work in Firefox version 2, with Java version 1.60_03 and higher! --working on it --[[User:Eran Hodis|Eran Hodis]] 20:13, 12 April 2008 (IDT) | <span style="background-color:yellow;color:green">'''SOLVED'''</span> Green links need to work in Firefox version 2, with Java version 1.60_03 and higher! --working on it --[[User:Eran Hodis|Eran Hodis]] 20:13, 12 April 2008 (IDT) | ||
| Line 31: | Line 31: | ||
<span style="background-color:yellow;color:green">'''SOLVED'''</span> ''On page [[1c96]], the ligand FLC (fluorocitrate?) is shown while, if you click on its green link, it's really a citrate. I don't know of other instances but I'll now look for them. --[[User:Ralf Stephan|Ralf Stephan]] 19:22, 15 February 2009 (IST) ♣ Ligand green links are generated from the PDB file. I checked the PDB file, and what is being displayed matches the PDB file. If this is really an error then please notify the PDB. They can fix the file, and we will update the page accordingly. --[[User:Eran Hodis|Eran Hodis]] 20:40, 15 February 2009 (IST) ♣ This is not really a problem. PDB (RCSB) is not required to name ligands and short molecules following any known nomenclature. In the structure file for 1c96 you may find this line: ''HETNAM FLC CITRATE ANION'' from where [[User:OCA|OCA]] gets the name for Proteopedia. Other interesting example can be found in structure 1yuh, featuring Np, the official symbol for Neptunium to indicate 3-nitropropanoic acid. [[User:Jaime_Prilusky|Jaime Prilusky]] Sun Feb 15 22:01:33 IST 2009 | <span style="background-color:yellow;color:green">'''SOLVED'''</span> ''On page [[1c96]], the ligand FLC (fluorocitrate?) is shown while, if you click on its green link, it's really a citrate. I don't know of other instances but I'll now look for them. --[[User:Ralf Stephan|Ralf Stephan]] 19:22, 15 February 2009 (IST) ♣ Ligand green links are generated from the PDB file. I checked the PDB file, and what is being displayed matches the PDB file. If this is really an error then please notify the PDB. They can fix the file, and we will update the page accordingly. --[[User:Eran Hodis|Eran Hodis]] 20:40, 15 February 2009 (IST) ♣ This is not really a problem. PDB (RCSB) is not required to name ligands and short molecules following any known nomenclature. In the structure file for 1c96 you may find this line: ''HETNAM FLC CITRATE ANION'' from where [[User:OCA|OCA]] gets the name for Proteopedia. Other interesting example can be found in structure 1yuh, featuring Np, the official symbol for Neptunium to indicate 3-nitropropanoic acid. [[User:Jaime_Prilusky|Jaime Prilusky]] Sun Feb 15 22:01:33 IST 2009 | ||
== Problems | == Problems, less urgent== | ||
'''Category: singular vs. plural:''' Category:Nucleosome and Category:Nucleosomes are two separate pages with nonoverlapping contents. It would be great if all pairs of the same term +/- a terminal "s" can be merged into a single page per such pair. [[User:Emartz|Emartz]] 19:32, 28 February 2008 (IST) | '''Category: singular vs. plural:''' Category:Nucleosome and Category:Nucleosomes are two separate pages with nonoverlapping contents. It would be great if all pairs of the same term +/- a terminal "s" can be merged into a single page per such pair. [[User:Emartz|Emartz]] 19:32, 28 February 2008 (IST) | ||
