2nmv: Difference between revisions

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New page: left|200px<br /><applet load="2nmv" size="450" color="white" frame="true" align="right" spinBox="true" caption="2nmv, resolution 2.95Å" /> '''Damage detection by ...
 
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[[Image:2nmv.gif|left|200px]]<br /><applet load="2nmv" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:2nmv.gif|left|200px]]<br /><applet load="2nmv" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="2nmv, resolution 2.95&Aring;" />
caption="2nmv, resolution 2.95&Aring;" />
'''Damage detection by the UvrABC pathway: Crystal structure of UvrB bound to fluorescein-adducted DNA'''<br />
'''Damage detection by the UvrABC pathway: Crystal structure of UvrB bound to fluorescein-adducted DNA'''<br />


==Overview==
==Overview==
UvrB is the damage recognition element of the highly conserved UvrABC, pathway that functions in the removal of bulky DNA adducts. Pivotal to, this is the formation of a damage detection complex that relies on the, ability of UvrB to locate and sequester diverse lesions. Whilst structures, of UvrB bound to DNA have recently been reported, none address the issue, of lesion recognition. Here, we describe the crystal structure of UvrB, bound to a pentanucleotide containing a single fluorescein-adducted, thymine that reveals a unique mechanism for damage detection entirely, dependent on the exclusion of lesions larger than an undamaged nucleotide.
UvrB is the damage recognition element of the highly conserved UvrABC pathway that functions in the removal of bulky DNA adducts. Pivotal to this is the formation of a damage detection complex that relies on the ability of UvrB to locate and sequester diverse lesions. Whilst structures of UvrB bound to DNA have recently been reported, none address the issue of lesion recognition. Here, we describe the crystal structure of UvrB bound to a pentanucleotide containing a single fluorescein-adducted thymine that reveals a unique mechanism for damage detection entirely dependent on the exclusion of lesions larger than an undamaged nucleotide.


==About this Structure==
==About this Structure==
2NMV is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with ADP, NML and FLU as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2NMV OCA].  
2NMV is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with <scene name='pdbligand=ADP:'>ADP</scene>, <scene name='pdbligand=NML:'>NML</scene> and <scene name='pdbligand=FLU:'>FLU</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NMV OCA].  


==Reference==
==Reference==
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[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Barrett, T.E.]]
[[Category: Barrett, T E.]]
[[Category: Eryilmaz, J.]]
[[Category: Eryilmaz, J.]]
[[Category: Geddes, S.]]
[[Category: Geddes, S.]]
[[Category: Waters, T.R.]]
[[Category: Waters, T R.]]
[[Category: ADP]]
[[Category: ADP]]
[[Category: FLU]]
[[Category: FLU]]
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[[Category: t-fluorescein]]
[[Category: t-fluorescein]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 12:48:11 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:08:31 2008''