User:Michael Strong/H1N1: Difference between revisions
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== NS1 Protein Structural Homolgy Model == | |||
<applet load='MNS21.pdb' size='300' frame='true' align='center' caption='NS1 Homology Model, Mexico Strain, [http://www.ncbi.nlm.nih.gov/nuccore/FJ998220 A/Mexico/InDRE4487/2009 NS1], residues 5-202, 84% sequence identity to pdp template [http://proteopedia.org/wiki/index.php/3f5t 3f5t]' scene ='User:Michael_Strong/H1N1/NS1/MSA/1/1'/> | |||
=== NS1 Sequence Polymorphisms === | |||
{| class="wikitable" | |||
|Protein | |||
|Polymorphism | |||
|Strain with Polymorphism | |||
|Number of Strains with Polymorphism | |||
|---- | |||
|NS1 | |||
|D12E | |||
|gi|229536107_A/Nebraska/02/200 | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/12/1'>12</scene> | |||
|---- | |||
|NS1 | |||
|F32L | |||
|gi|229535811_A/Texas/09/2009 | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/32/1'>32</scene> | |||
|---- | |||
|NS1 | |||
|G45R | |||
|gi|229598886_A/Texas/15/2009 | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/45/1'>45</scene> | |||
|---- | |||
|NS1 | |||
|R88C | |||
|gi|229536033_A/Minnesota/02/20 | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/88/1'>88</scene> | |||
|---- | |||
|NS1 | |||
|E97G | |||
|gi|229892754_A/Canada-NS/RV153 | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/97/1'>97</scene> | |||
|---- | |||
|NS1 | |||
|M104T | |||
|gi|237624336_A/swine/Alberta/O | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/104/1'>104</scene> | |||
|---- | |||
|NS1 | |||
|I123V | |||
|gi|229892764_A/Canada-AB/RV153 | |||
|15 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/123/1'>123</scene> | |||
|---- | |||
|NS1 | |||
|F134I | |||
|gi|237624336_A/swine/Alberta/O | |||
|1 | |||
|<scene name='User:Michael_Strong/H1N1/NS1/MSA/134/1'>134</scene> | |||
|---- | |||
|} | |||
<scene name='User:Michael_Strong/H1N1/NS1/MSA/All/2'>All Polymorphisms</scene> | |||