Sandbox1111: Difference between revisions

Revision as of 03:39, 22 May 2009

This sandbox is in use until June 1, 2009 for UMass Chemistry 490a. Others please do not edit this page. Thanks!

Replace the PDB id (use lowercase!) after the STRUCTURE_ and after PDB= to load and display another structure.

Ligands:

CL, MG, NAD

Gene:

TM1419, TM_1419 (Thermotoga maritima MSB8)

Activity:

Inositol-3-phosphate synthase, with EC number 5.5.1.4

Structural annotation:
Resources:	CATH : 3Cina01, 3Cina02 InterPro : Ipr016040, Ipr013021, Ipr002587 Pfam : PF07994

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Coordinates:

save as pdb, mmCIF, xml

Beta Sheet are portrayed in purple.

Alpha Helices are portrayed in blue

Polar bonds in dark green

@@ Line 1: / Line 1: @@
-==NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX==
 '''This sandbox is in use until June 1, 2009 for UMass Chemistry 490a. Others please do not edit this page. Thanks!'''
-This is a placeholder text to help you get started in
+==Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8==
-placing a Jmol applet on your page. At any time, click
-"Show Preview" at the bottom of this page to see how it goes.
 Replace the PDB id (use lowercase!) after the STRUCTURE_ and after PDB= to load
 and display another structure.
-{{STRUCTURE_3cin |  PDB=1cjg  |  SCENE=  }}
+{{STRUCTURE_3cin |  PDB=1pq2  |  SCENE=  }}
+<scene name='Sandbox1111/Beta/1'>Beta Sheet</scene> are portrayed in purple.
+<scene name='Sandbox1111/Alpha/3'>Alpha Helices</scene> are portrayed in blue
+<scene name='Sandbox1111/Hydrophobic_red/1'>Hydrophobic interactions</scene> in red
+<scene name='Sandbox1111/Polar_bonds/1'>Polar bonds</scene> in dark green