Protein Explorer: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs)
polishing
Eric Martz (talk | contribs)
polishing
Line 23: Line 23:
* Its NMR/Animation control panel facilitates exploration and animation of multiple-model PDB files, with great flexibility and control. It generates an animation script, from menus and buttons, that runs in both Chime and RasMol. Running this script in RasMol saves each frame as a .gif snapshot file, and these can then be assembled into a multi-gif movie. [http://proteinexplorer.org/morfdoc.htm Examples].
* Its NMR/Animation control panel facilitates exploration and animation of multiple-model PDB files, with great flexibility and control. It generates an animation script, from menus and buttons, that runs in both Chime and RasMol. Running this script in RasMol saves each frame as a .gif snapshot file, and these can then be assembled into a multi-gif movie. [http://proteinexplorer.org/morfdoc.htm Examples].


* Protein Explorer's MSA3D can color a 3D protein model by evolutionary conservation from a multiple-sequence alignment containing as few as two sequences. Although the [[Conservation, Evolutionary|ConSurf Server]] does a superior job of mapping evolutionary conservation onto a 3D structure, it requires a minimum of five sequences.
* Protein Explorer's MSA3D can color a 3D protein model by evolutionary conservation from a multiple-sequence alignment containing as few as two sequences. Although the [[Conservation, Evolutionary|ConSurf Server]] calculates evolutionary conservation with a greatly superior algorithm (and then colors the 3D model accordingly), it requires a minimum of five sequences.


==See Also==
==See Also==