1rrq: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
New page: left|200px<br /><applet load="1rrq" size="450" color="white" frame="true" align="right" spinBox="true" caption="1rrq, resolution 2.22Å" /> '''MutY adenine glycosy...
 
OCA (talk | contribs)
No edit summary
Line 1: Line 1:
[[Image:1rrq.gif|left|200px]]<br /><applet load="1rrq" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1rrq.gif|left|200px]]<br /><applet load="1rrq" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1rrq, resolution 2.22&Aring;" />
caption="1rrq, resolution 2.22&Aring;" />
'''MutY adenine glycosylase in complex with DNA containing an A:oxoG pair'''<br />
'''MutY adenine glycosylase in complex with DNA containing an A:oxoG pair'''<br />


==Overview==
==Overview==
The genomes of aerobic organisms suffer chronic oxidation of guanine to, the genotoxic product 8-oxoguanine (oxoG). Replicative DNA polymerases, misread oxoG residues and insert adenine instead of cytosine opposite the, oxidized base. Both bases in the resulting A*oxoG mispair are mutagenic, lesions, and both must undergo base-specific replacement to restore the, original C*G pair. Doing so represents a formidable challenge to the DNA, repair machinery, because adenine makes up roughly 25% of the bases in, most genomes. The evolutionarily conserved enzyme adenine DNA glycosylase, (called MutY in bacteria and hMYH in humans) initiates repair of A*oxoG to, C*G by removing the inappropriately paired adenine base from the DNA, backbone. A central issue concerning MutY function is the mechanism by, which A*oxoG mispairs are targeted among the vast excess of A*T pairs., Here we report the use of disulphide crosslinking to obtain, high-resolution crystal structures of MutY-DNA lesion-recognition, complexes. These structures reveal the basis for recognizing both lesions, in the A*oxoG pair and for catalysing removal of the adenine base.
The genomes of aerobic organisms suffer chronic oxidation of guanine to the genotoxic product 8-oxoguanine (oxoG). Replicative DNA polymerases misread oxoG residues and insert adenine instead of cytosine opposite the oxidized base. Both bases in the resulting A*oxoG mispair are mutagenic lesions, and both must undergo base-specific replacement to restore the original C*G pair. Doing so represents a formidable challenge to the DNA repair machinery, because adenine makes up roughly 25% of the bases in most genomes. The evolutionarily conserved enzyme adenine DNA glycosylase (called MutY in bacteria and hMYH in humans) initiates repair of A*oxoG to C*G by removing the inappropriately paired adenine base from the DNA backbone. A central issue concerning MutY function is the mechanism by which A*oxoG mispairs are targeted among the vast excess of A*T pairs. Here we report the use of disulphide crosslinking to obtain high-resolution crystal structures of MutY-DNA lesion-recognition complexes. These structures reveal the basis for recognizing both lesions in the A*oxoG pair and for catalysing removal of the adenine base.


==About this Structure==
==About this Structure==
1RRQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus] with CA and SF4 as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1RRQ OCA].  
1RRQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=SF4:'>SF4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RRQ OCA].  


==Reference==
==Reference==
Line 14: Line 14:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Banerjee, A.]]
[[Category: Banerjee, A.]]
[[Category: Fromme, J.C.]]
[[Category: Fromme, J C.]]
[[Category: Huang, S.J.]]
[[Category: Huang, S J.]]
[[Category: Verdine, G.L.]]
[[Category: Verdine, G L.]]
[[Category: CA]]
[[Category: CA]]
[[Category: SF4]]
[[Category: SF4]]
Line 24: Line 24:
[[Category: protein-dna complex]]
[[Category: protein-dna complex]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 23:09:10 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:53:52 2008''