PyMOL: Difference between revisions

Line 1:

[http://pymol.org PyMOL] is a stand-alone [[Molecular modeling and visualization software|molecular visualization]] program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren DeLano].

[http://pymol.org PyMOL] is a stand-alone [[Molecular modeling and visualization software|molecular visualization]] program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren DeLano]. Effective use of PyMOL requires that you become familiar with highly abbreviated menus, and/or a command scripting language.

Molecular scenes prepared in PyMOL can be imported into Protoepedia scenes, using the [[PyMOL2Jmol_Translator]], which allows you to choose a PyMOL session file (.pse file) that you have saved on your computer and have it converted directly into a Jmol scene to be saved and displayed in Proteopedia.

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

Revision as of 16:29, 17 August 2009 view source Eric Martz (talk \| contribs) ConfirmAccount, Editor, Print3D, Tester, journal, Administrators 30,118 edits Adding PyMOL2Jmol_Translator ← Older edit		Revision as of 18:29, 24 October 2009 view source Eric Martz (talk \| contribs) ConfirmAccount, Editor, Print3D, Tester, journal, Administrators 30,118 edits added "effective use" comment in first paragraph. Newer edit →
Line 1:		Line 1:
	[http://pymol.org PyMOL] is a stand-alone [[Molecular modeling and visualization software\|molecular visualization]] program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren DeLano].		[http://pymol.org PyMOL] is a stand-alone [[Molecular modeling and visualization software\|molecular visualization]] program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren DeLano]. Effective use of PyMOL requires that you become familiar with highly abbreviated menus, and/or a command scripting language.

	Molecular scenes prepared in PyMOL can be imported into Protoepedia scenes, using the [[PyMOL2Jmol_Translator]], which allows you to choose a PyMOL session file (.pse file) that you have saved on your computer and have it converted directly into a Jmol scene to be saved and displayed in Proteopedia.		Molecular scenes prepared in PyMOL can be imported into Protoepedia scenes, using the [[PyMOL2Jmol_Translator]], which allows you to choose a PyMOL session file (.pse file) that you have saved on your computer and have it converted directly into a Jmol scene to be saved and displayed in Proteopedia.