User:Wayne Decatur/Biochem642 Molecular Visualization Sessions: Difference between revisions

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Wayne Decatur (talk | contribs)
Editor, widgeteditor
7,824 edits
Wayne Decatur (talk | contribs)
Editor, widgeteditor
7,824 edits
Line 93: Line 93:


*Using the wikitext toolbar as an alternative way to make a 3D Jmol applet window:<br>
*Using the wikitext toolbar as an alternative way to make a 3D Jmol applet window:<br>
Instead of copying from elsewhere and then pasting the wikitext specifying an applet window into a spot on your page, you can use the wiki toolbar that show above the edit window in edit mode.
:Instead of copying from elsewhere and then pasting the wikitext specifying an applet window into a spot on your page, you can use the wiki toolbar that show above the edit window in edit mode.
##Enter edit mode if you aren't in it, by pressing 'edit this page' up at the top of the page.
#Enter edit mode if you aren't in it, by pressing 'edit this page' up at the top of the page.
##Click the button that says '3D' on the right of the toolbar.
#Click the button that says '3D' on the right of the toolbar.
##Edit load parameter to have the pdb ID code you need and edit the caption if you want.
#Edit load parameter to have the pdb ID code you need and edit the caption if you want.
##Edit any of the other parameters as you choose.
#Edit any of the other parameters as you choose.
##You can also add a scene parameter and the name of one of your scenes in between the single quotes, if you desire. For example:<br>
#You can also add a scene parameter and the name of one of your scenes in between the single quotes, if you desire. For example:<br>
<nowiki><applet load='1d66' size='400' frame='true' align='right' scene='SandboxNUMBER/YOURSceneHERE/1' caption='Your caption here.' /></nowiki>
<nowiki><applet load='1d66' size='400' frame='true' align='right' scene='SandboxNUMBER/YOURSceneHERE/1' caption='Your caption here.' /></nowiki>


*Getting wikitext or scene names for old scenes or if you forgot to copy the scene before:
*Getting wikitext or scene names for old scenes or if you forgot to copy the scene before:
##Enter edit mode if you aren't in it, by pressing 'edit this page' up at the top of the page.
#Enter edit mode if you aren't in it, by pressing 'edit this page' up at the top of the page.
##Show the Scene Authoring tools.
##Show the Scene Authoring tools.
##Click the 'load scene' tab and use the menu to find and select the scene name and version number.
#Click the 'load scene' tab and use the menu to find and select the scene name and version number.
##The scene will then come up in the Jmol window at the right and the wikitext will appear in the window at the bottom.
#The scene will then come up in the Jmol window at the right and the wikitext will appear in the window at the bottom.
##Copy the wikitext you need or just the name of the scene, if that is all you need.  
#Copy the wikitext you need or just the name of the scene, if that is all you need.  
##Paste that information where you need it.
#Paste that information where you need it.




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