User:Wayne Decatur/3ewsSLASH3g0h Morph methods: Difference between revisions
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<applet load='3g0h' size='300' frame='true' align='right' caption='Insert caption here' /> | <applet load='3g0h' size='300' frame='true' align='right' caption='Insert caption here' /> | ||
Took the two files and submitted them. | Took the two files and submitted them. | ||
The structures did have nucleic acids; however, in the past I knew [http://molmovdb.org/cgi-bin/beta.cgi the beta server] handled them so I used it. (This time the result just had chain A since I didn't have the nucleic in both structures.) | |||
I got the e-mail and followed the link to a Jmol animation of the morph. | |||
I right clicked on the Jmol frank and click the top entry in the menu and then the bottom spot in the menu that came up to download the structures in the morph. | |||
By the way, the structure that came back from the server didn't have secondary structure when I looked at it in PyMol so I chose from the action meni on the right 'assign sec. str.' and it assigned it (for viewing) for all models and was very close to the crystal secondary structure. Since I didn't save this though, it didn't affect the Morph file. | |||
Uploaded to Proteopedia [[Image:3fpntorotatedversion.pdb]]. <br> | Uploaded to Proteopedia [[Image:3fpntorotatedversion.pdb]]. <br> | ||
