User:Wayne Decatur/3ewsSLASH3g0h Morph methods: Difference between revisions
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However, while that worked for model 8, the ligand of model 1 was off to the side because it needed translating to where model 1 was in the morph which is not the same as 3ews. To move, I copied the 3ews part from the moprh and opened it in Swiss-PDB Viewer. Then with MagicFit allowed in 'Loading protein' under preference, I loaded the actual 3ews pdb file. Then I saved the new layer and extracted the information for ADP and placed that as the ADP heteratom information in the Morph file for model 1. | However, while that worked for model 8, the ligand of model 1 was off to the side because it needed translating to where model 1 was in the morph which is not the same as 3ews. To move, I copied the 3ews part from the moprh and opened it in Swiss-PDB Viewer. Then with MagicFit allowed in 'Loading protein' under preference, I loaded the actual 3ews pdb file. Then I saved the new layer and extracted the information for ADP and placed that as the ADP heteratom information in the Morph file for model 1. | ||
Uploaded to Proteopedia [[Image: | Uploaded to Proteopedia [[Image:3ews3g0hmorphFIXED.pdb.gz]]. <br> | ||
loaded ' | loaded '3ews3g0hmorphFIXED.pdb.gz' in Scene Authoring Tools.<br> | ||
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<scene name='User:Wayne_Decatur/3ewsSLASH3g0h_Morph_methods/ | <scene name='User:Wayne_Decatur/3ewsSLASH3g0h_Morph_methods/3ewsto3g0hmorph/1'>TextToBeDisplayed</scene> | ||
<nowiki>[</nowiki>Control the animation with the 'animation' submenu on the menu that comes up if you click on the Jmol frank in the bottom right corner. Also, if the animation seems to be stuck, scroll in the bar on the right of your browser.<nowiki>]</nowiki> | <nowiki>[</nowiki>Control the animation with the 'animation' submenu on the menu that comes up if you click on the Jmol frank in the bottom right corner. Also, if the animation seems to be stuck, scroll in the bar on the right of your browser.<nowiki>]</nowiki> | ||
==Paper on the structure== | ==Paper on the structure== | ||
<ref group="xtra">PMID:19244245</ref><references group="xtra"/> | <ref group="xtra">PMID:19244245</ref><references group="xtra"/> | ||
