Sandbox 135: Difference between revisions

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Yurie T. Kim's Page


==T7 Polymerase residue 632 and 639 with Nucleotides==
'''== Yurie T. Kim's T7 Polymerase Scene=='''
 
 
== Figure 1 ==




<applet load='1msw' size='600' frame='true' align='left' scene='Sandbox_135/1msw_simplified/1' caption='1MSW' />
<applet load='1msw' size='600' frame='true' align='left' scene='Sandbox_135/1msw_simplified/1' caption='1MSW' />
<scene name='Sandbox_135/1msw_simplified/1'>Binding of R632 and Y639</scene>
<scene name='Sandbox_135/1msw_simplified/1'>Binding of R632 and Y639</scene>
Figure 1 structure shows T7 polymerase binding with simplification to just show Residue R632 and Y639
Figure 2


<applet load='1msw' size='600' frame='true' align='center' scene='Sandbox_135/1msw/1' caption='original' />
<applet load='1msw' size='600' frame='true' align='center' scene='Sandbox_135/1msw/1' caption='original' />
<scene name='Sandbox_135/1msw/1'>Residue 28-60</scene>
<scene name='Sandbox_135/1msw/1'>Residue 28-60</scene>
Figure 3


<applet load='1qln' size='600' frame='true' align='right' scene='Sandbox_135/1qln/1' caption='New' />
<applet load='1qln' size='600' frame='true' align='right' scene='Sandbox_135/1qln/1' caption='New' />
<scene name='Sandbox_135/1qln/1'>Residue 28-60</scene>
<scene name='Sandbox_135/1qln/1'>Residue 28-60</scene>
Figure 2 and 3 structures shows T7 polymerase. Specifically those show intensified residue from 28 to 60.
For Figure 2 intensified residues are brown where as for Figure 3 intensified residues are green.

Revision as of 12:22, 25 November 2009

== Yurie T. Kim's T7 Polymerase Scene==


Figure 1

1MSW

Drag the structure with the mouse to rotate

Binding of R632 and Y639

Figure 1 structure shows T7 polymerase binding with simplification to just show Residue R632 and Y639


Figure 2


original

Drag the structure with the mouse to rotate

Residue 28-60


Figure 3


New

Drag the structure with the mouse to rotate

Residue 28-60


Figure 2 and 3 structures shows T7 polymerase. Specifically those show intensified residue from 28 to 60. For Figure 2 intensified residues are brown where as for Figure 3 intensified residues are green.

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