User:Laura Carbone/Sandbox 1: Difference between revisions
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===Primary & Secondary Structure=== | ===Primary & Secondary Structure=== | ||
{{STRUCTURE_1ema | PDB=1ema | scene name='User:Laura_Carbone/Sandbox_1/Initial/1' }} | |||
<applet load='1ema' size='400' frame='true' align='right' scene='User:Laura_Carbone/Sandbox_1/Initial/1' /> | <applet load='1ema' size='400' frame='true' align='right' scene='User:Laura_Carbone/Sandbox_1/Initial/1' /> | ||
<scene name='User:Laura_Carbone/Sandbox_1/Initial/1'>Green fluorescent protein</scene> consists of 238 residues strung together to form | <scene name='User:Laura_Carbone/Sandbox_1/Initial/1'>Green fluorescent protein</scene> consists of 238 residues strung together to form | ||
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==Related Structures and Topics== | ==Related Structures and Topics== | ||
*[[1ema]] ''Aequorea victoria'' Green Fluorescent Protein, monomer | *[[1ema]] ''Aequorea victoria'' Green Fluorescent Protein, monomer | ||
*[[1gfl]] ''Aequorea victoria'' Green Fluorescent Protein, dimer | *[[1gfl]] ''Aequorea victoria'' Green Fluorescent Protein, dimer | ||
*[[1w7s]] ''Aequorea victoria'' Green Fluorescent Protein, wild-type tetramer | *[[1w7s]] ''Aequorea victoria'' Green Fluorescent Protein, wild-type tetramer | ||
*[[1emb]] ''Aequorea victoria'' Green Fluorescent Protein, Gln<sup>80</sup> replaced with Arg | *[[1emb]] ''Aequorea victoria'' Green Fluorescent Protein, Gln<sup>80</sup> replaced with Arg | ||
*[[1b9c]] ''Aequorea victoria'' Green Fluorescent Protein Mutant F99s, M153t And V163a< | *[[1b9c]] ''Aequorea victoria'' Green Fluorescent Protein Mutant F99s, M153t And V163a | ||
*[[1bfp]] ''Aequorea victoria'' Blue Variant of Green Fluorescent Protein | *[[1qxt]] Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (A) | ||
*[[1yfp]] ''Aequorea victoria'' Yellow Variant of Green Fluorescent Protein | *[[1qy3]] Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (B) | ||
*[ | *[[1qyo]] Anaerobic precylization intermediate crystal structure for S<sup>65</sup> Y<sup>66</sup> GFP variant | ||
*[[1qyq]] Crystal Structure of the cyclized S<sup>65</sup> Y<sup>66</sup> GFP variant | |||
*[[1jbz]] Crystal Structure analysis of a dual-wavelength emission green fluorescent protein variant at high pH | |||
*[[1jby]] Crystal Structure analysis of a dual-wavelength emission green fluorescent protein variant at low pH | |||
*[[1bfp]] ''Aequorea victoria'' Blue Variant of Green Fluorescent Protein | |||
*[[1yfp]] ''Aequorea victoria'' Yellow Variant of Green Fluorescent Protein | |||
*[[1huy]] Crystal structure of citrine, an improved yellow variant of green fluorescent protein | |||
==Reference for this Structure== | ==Reference for this Structure== | ||
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{{Reflist}} | {{Reflist}} | ||
==Additional Resources== | |||
*[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ema First Glance] | |||
*PDBsum: [http://www.ebi.ac.uk/pdbsum/1ema 1ema] | |||
*RCSB PDB [http://www.rcsb.org/pdb/explore.do?structureId=1ema 1ema] | |||
*[http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ema OCA] | |||
*UniProt: [http://www.uniprot.org/uniprot/P42212 P42212] | |||
*Scop: [http://scop.mrc-lmb.cam.ac.uk/scop/data/scop.b.e.gc.b.b.b.html P42212] | |||
*CATH: [http://www.cathdb.info/domain/1emaA00 1emaA00] | |||
*Pfam: [http://pfam.sanger.ac.uk/family?acc=PF01353 PF01353] | |||
*InterPro: [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000786 IPR000786] | |||
*[http://www.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb42_1.html GFP featured] at the '''[http://www.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month]''' series of tutorials by [[User:David_S._Goodsell|David Goodsell]]. | |||
