ConSurfDB vs. ConSurf: Difference between revisions
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#When you are satisfied, scroll back to the bottom of the sequences list and click the ''Submit'' button. | #When you are satisfied, scroll back to the bottom of the sequences list and click the ''Submit'' button. | ||
The results of | The results of this "one function" job will usually enable you to identify more functional sites than did the ConSurf-DB result built into Proteopedia. | ||
See [[#How to Insert a ConSurf Result Into a Proteopedia Green Link|below]] for instructions on how to make a green-link scene in Proteopedia that shows your single-function ConSurf result. | See [[#How to Insert a ConSurf Result Into a Proteopedia Green Link|below]] for instructions on how to make a green-link scene in Proteopedia that shows your single-function ConSurf result. | ||
If your results have more than a few amino acids with insufficient data (<font color="#c0c000"><b>yellow color</b></font>), you need more sequences. Repeat the procedure above with one change in the ConSurf job submission form: under ''Advanced Options'', use the much larger '''Uniprot''' database instead of the default Swiss-Prot database. | If your results have more than a few amino acids with insufficient data (<font color="#c0c000"><b>yellow color</b></font>), you need more sequences. Repeat the procedure above with one change in the ConSurf job submission form: under ''Advanced Options'', use the much larger '''Clean Uniprot''' database instead of the default Swiss-Prot database. | ||
==The ConSurf-DB Mechanism== | ==The ConSurf-DB Mechanism== | ||
