User:Wayne Decatur/3kg2 Morph Methods: Difference between revisions
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Used [http://molmovdb.org/cgi-bin/beta.cgi Beta server] - mainly because it allows turning off fitting so I can show relationship (symmetry operations until the SYMOP functions within Jmol work within Proteopedia when newer version added) of identical conformations, left fitting on for showing difference between chain A and chain B. | Used [http://molmovdb.org/cgi-bin/beta.cgi Beta server] - mainly because it allows turning off fitting so I can show relationship (symmetry operations until the SYMOP functions within Jmol work within Proteopedia when newer version added) of identical conformations, left fitting on for showing difference between chain A and chain B. | ||
OTHER THING I HAD TO DO OF COURSE WAS THE MORPHS I DECIDED TO USE WITHOUT ROTATION AS I RECEIVED THEM FROM THE SERVER (THE ONES RELATING TO SYMMETRY OF EQUIVALENT SUBUNITS) I HAD TO AT LEAST CHANGE THE MODEL NUMBERS TO NOT INCLUDE 'MODEL 0'. JUST ADDING 1 TO EACH FIXED. | |||
==TRYING TO GET TO LOAD WITH VIEW ALREADY CLOSER TO WHAT I WANT WHEN LOADED FILE OPENED IN PROTEOPEDIA== | ==TRYING TO GET TO LOAD WITH VIEW ALREADY CLOSER TO WHAT I WANT WHEN LOADED FILE OPENED IN PROTEOPEDIA== | ||
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After various fitting steps I used the reoriented version to reorient one of them to that by fit and then deleted the model I fit it to and then fit again between the domains and saved as separate files from when I did it without reorientation. | After various fitting steps I used the reoriented version to reorient one of them to that by fit and then deleted the model I fit it to and then fit again between the domains and saved as separate files from when I did it without reorientation. | ||
