User:Wayne Decatur/kink-turn motif: Difference between revisions

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==Introduction==
==Introduction==
<table width=260' align='right' cellpadding='0'><tr><td rowspan='2'>&nbsp;</td><td bgcolor='#eeeeee'><applet load='Image:Kt7.pdb.gz' size='260' frame='true' align='right' scene='User:Wayne_Decatur/kink-turn_motif/Ktcylinders/1' /></td></tr><tr><td bgcolor='#eeeeee'><center>
{{Button Toggle NucleicDrumsColorScheme}} {{ColorKey Bases RNA}}
</center></td></tr></table>
Originally identified in the course of analyzing the [[Large Ribosomal Subunit of Haloarcula|large ribosomal subunit]]<ref name="kleinref">PMID: 11483524</ref>, this RNA structural motif was also identified in other RNAs. Particular instances have been called the GA motif <ref>PMID: 11497434</ref>
Originally identified in the course of analyzing the [[Large Ribosomal Subunit of Haloarcula|large ribosomal subunit]]<ref name="kleinref">PMID: 11483524</ref>, this RNA structural motif was also identified in other RNAs. Particular instances have been called the GA motif <ref>PMID: 11497434</ref>
The kink-turn motif includes the [[A-minor motif]].
The kink-turn motif includes the [[A-minor motif]].
Many kink-turns bind proteins; however, that trait is not universal. They can mediate RNA tertiary structure interactions as well.
Many kink-turns bind proteins; however, that trait is not universal. They can mediate RNA tertiary structure interactions as well.


An excellent introduction can be found [http://www.dundee.ac.uk/biocentre/nasg/kturn/index.php here as part of a structural database for k-turn motifs in RNA by the Lilley group]<ref name="lilleydatabase">PMID: 20562215</ref>.
An excellent introduction can be found [http://www.dundee.ac.uk/biocentre/nasg/kturn/index.php here as part of a structural database for k-turn motifs in RNA by the Lilley group]
<table width=200' align='right' cellpadding='0'><tr><td rowspan='2'>&nbsp;</td><td bgcolor='#eeeeee'><applet load='Image:Kt7.pdb.gz' size='200' frame='true' align='right' scene='User:Wayne_Decatur/kink-turn_motif/Ktcylinders/1' /></td></tr><tr><td bgcolor='#eeeeee'><center>
{{Button Toggle NucleicDrumsColorScheme}} {{ColorKey Bases RNA}}
</center></td></tr></table>
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