Structure superposition tools: Difference between revisions
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*3.02 Å RMSD RIGID alignment includes 298 residues. | *3.02 Å RMSD RIGID alignment includes 298 residues. | ||
*P value: 5 x 10<sup>-8</sup> (used instead of z-score to take twists into account). | *P value: 5 x 10<sup>-8</sup> (used instead of z-score to take twists into account). | ||
*10.2% sequence identity in the structurally aligned regions. | |||
*The structure-based sequence alignment has many gaps, looking similar to that generated by CE. | |||
*FLEXIBLE alignment introduced ZERO twists (hinges), so gave the same result as the rigid alignment. | *FLEXIBLE alignment introduced ZERO twists (hinges), so gave the same result as the rigid alignment. | ||
====MAMMOTH example==== | ====MAMMOTH example==== | ||
