Jmol/Visualizing large molecules: Difference between revisions
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Eric Martz (talk | contribs) |
Eric Martz (talk | contribs) |
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:<tt>frame all | :<tt>frame all | ||
:color chain</tt> | :color chain</tt> | ||
If you wish, you can save the alpha-carbon atom models: | |||
:<tt>write pdb 2hyn_ca_only.pdb</tt> | |||
This file could be uploaded to Proteopedia for use in the [[SAT]]. | |||
==Biological Assemblies== | ==Biological Assemblies== | ||
However, [[biological unit]] assemblies generated from PDB files often exceed this limit by using redundant serial numbers for copied chains. Luckily, Jmol ignores the serial numbers in the PDB file, and can handle models with >100,000 atoms. | However, [[biological unit]] assemblies generated from PDB files often exceed this limit by using redundant serial numbers for copied chains. Luckily, Jmol ignores the serial numbers in the PDB file, and can handle models with >100,000 atoms. | ||
