Sandbox reserved 330: Difference between revisions

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== Background Information==
== Background Information==
- addition modules have two genes: toxin genes and an antitoxin genes
- modules mediate plasmid maintenance by killing plasmid free cells via what you call, post segregational killing.
- Operons are autoregulated at transcriptional level to control toxin/antitoxin modules
- Maintenance prevents the lethal effect of the toxin.
- There have been two structures that are found, that have similar 3D structure
- 1. Kid from E.coli in plasmid R1
- 2. CcdB from E.coli in plasmid F.
- modules found so far such as ChpA/MazEF and ChpB, which are homologous genes to the addiction modules, are involved in cell death that is thought to be triggered by antibiotics.
- operons encode stable toxin and their antidote
- opersons play an important role in plasmid partitioning and cellular response to stress.
- Family of toxins (MazF/ChpAK/PemK) encodes endoribonuclease that activates cellular mRNAs by cleaving them at specific sites
- This study, there is a B.subtilis gene encode a member of RNases that they call Endo A.
- A coexpression of an upstream gene (YdcD) reverses toxin.
- YdcD inhibits EndoA activity.
- endoA has similar cleavage patterns specificity to MazF/PemK, with cleavage produces with a 3’P and 5’OH group.
- This is the first example of an antitoxin-toxin system of B. subtilis.
- bacteria rely on addiction modules to maintain plasmids within populations.
- These modules consist of operon where one cistron encodes a stable toxin and is preceded by an encoding unstable antitoxin.
- Cells that do not inherit the plasmid encoded operon will not produce antitoxin and inhibited by the toxin via post segregational killing.
- So once this operon is expressed, the bacterial strain is addicted to the antitoxin for survival.
- It is known that genomes of most bacteria has a toxin-antitoxin TA loci.
- These loci have been shown to be induced by stressful conditions.
- It has been shown that antitoxin can also inhibit its own expression by binding to its own promoter region with complexed toxin as corepressor.
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==Structure==
==Structure==