Sandbox Reserved 325: Difference between revisions
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=Chorismate Mutase= | =Chorismate Mutase= | ||
==Introduction== | ==Introduction== | ||
The gene Rv1885c from ''Mycobacteriam tuberculosis'' encodes for a non-functional chorismate mutase (*MtCM)<ref name="pizza" />. This non-functional mutase has a 33-amino-acid cleavable sequence <ref name="pizza" />. It is a vital enzyme in the shikimate pathway, which allows for the synthesis of tryptophan, tyrosinem and phenylalanine <ref name="pizza" />. This protein acts at the first branch point of the shikimate pathway, making it a regulating step in the conversion of prephenate from chorismate<ref name="CMW2"> PMID:PMC55368 </ref>. Chorismate mutase provides a 2x10<sup>6</sup> fold increase in the rate of reacrion in comparision to the uncatalyzed reaction <ref > P.D. Lyne, A.J. Mulholland, W.G. Richards. Insights into chorismate mutase catalysis from a combined qm/mm simulation of the enzyme reaction. Journal of the American Chemistry Society. 1995 117(45):11345-11350</ref>. Chorismate mutase only occurs in bacteria, higher plants, and fungi, due to the fact that the shikimate pathway is only found in these organisms <ref name="strat" />. In ''Escherichia coli'', chorismate mutase has a periplasmic destination<ref name="pizza" />. In ''M. tuberculosis'' there is in abscence of a periplasmic compartment for chorismate mutase, so it secretes into the culture filtrate of ''M. tuberculosis''<ref name="pizza" />. It is believed that a pseudoperiplasmic space might exist in ''M. tuberculosis''<ref name="pizza" />. Rv1885c is synthesized along with the 33-amino-acid terminal sequence, which when expressed with ''E. coli'', is cleaved off the mature protein<ref name="pizza" />. Chorismate mutase is the only example of an enzyme catalyzing a percyclic reaction <ref name="strat"> PMID:10960481 </ref> | The gene Rv1885c from ''Mycobacteriam tuberculosis'' encodes for a non-functional chorismate mutase (*MtCM)<ref name="pizza" />. This non-functional mutase has a 33-amino-acid cleavable sequence <ref name="pizza" />. It is a vital enzyme in the shikimate pathway, which allows for the synthesis of tryptophan, tyrosinem and phenylalanine <ref name="pizza" />. This protein acts at the first branch point of the shikimate pathway, making it a regulating step in the conversion of prephenate from chorismate<ref name="CMW2"> PMID:PMC55368 </ref>. Chorismate mutase provides a 2x10<sup>6</sup> fold increase in the rate of reacrion in comparision to the uncatalyzed reaction <ref > P.D. Lyne, A.J. Mulholland, W.G. Richards. Insights into chorismate mutase catalysis from a combined qm/mm simulation of the enzyme reaction. Journal of the American Chemistry Society. 1995 117(45):11345-11350</ref>. Chorismate mutase only occurs in bacteria, higher plants, and fungi, due to the fact that the shikimate pathway is only found in these organisms <ref name="strat" />. In ''Escherichia coli'', chorismate mutase has a periplasmic destination<ref name="pizza" />. In ''M. tuberculosis'' there is in abscence of a periplasmic compartment for chorismate mutase, so it secretes into the culture filtrate of ''M. tuberculosis''<ref name="pizza" />. It is believed that a pseudoperiplasmic space might exist in ''M. tuberculosis''<ref name="pizza" />. The N-terminal sequence of ''M. tuberculosis'' chorismate mutase is able to function in ''E. coli'' which suggests that ''M. tuberulosis'' chorismate mutase belongs to the AroQ class of the chorismate mutases<ref name="CMW2" />. Rv1885c is synthesized along with the 33-amino-acid terminal sequence, which when expressed with ''E. coli'', is cleaved off the mature protein<ref name="pizza" />. Chorismate mutase is the only example of an enzyme catalyzing a percyclic reaction <ref name="strat"> PMID:10960481 </ref> | ||
==Structure== | |||
<Structure load='2f6l' size='300' frame='true' align='left' caption='Insert caption here' scene='Sandbox_Reserved_325/Chainbows/1' /> | |||
Chorismate mutase is a homodimer which has an all-α-helical structure <ref name="pizza" />. It holds its dimeric state in a protein concentration as low as 5 nM <ref name="pizza" />. Chorismate has an active site, which is used for the catalysis of the shikimate pathway <ref name="pizza" /> | |||
active site forms in single chain without help from second half of dimer | active site forms in single chain without help from second half of dimer | ||
active site is critical for catalysis. it is made up of Arg 49, Lys 60, Arg 72, Thr 105, Glu 109, and Arg 134 | active site is critical for catalysis. it is made up of Arg 49, Lys 60, Arg 72, Thr 105, Glu 109, and Arg 134 | ||
| Line 96: | Line 61: | ||
no func in non-shik pathways like those of macrophages of mammals. target this for TB infection | no func in non-shik pathways like those of macrophages of mammals. target this for TB infection | ||
ph is 4.5 om tb macrophage enviro. acidic. | ph is 4.5 om tb macrophage enviro. acidic. | ||
Mycobacterium tuberculosis (Mtb)1 has developed ingenious | |||
mechanisms to survive inside the hostile environment presented | |||
by the host and to acquire essential nutrients from this | |||
adverse environment (1–3). The emergence of drug-resistant | |||
strains and synergy with the AIDS virus has further aggravated | |||
the disease scenario (4–6). For the development of new | |||
therapeutic intervention strategies, there is a need for identification | |||
of novel targets that are not only unique to Mtb but | |||
blocking of which would either prove lethal to the bacterium or | |||
render it extremely susceptible to the host immune response. | |||
In this context, understanding the mechanism of action of the | |||
aromatic amino acid pathway enzymes of Mtb assumes the | |||
utmost importance because most of the corresponding genes | |||
have been proven essential for the bacterium and have no | |||
human or mammalian counterpart (7, 8). Moreover, amino acid | |||
auxotrophs of Mtb do not survive or multiply in macrophages | |||
(9, 10), suggesting that these amino acids are not available | |||
within the compartment of the macrophage in which the bacteria | |||
reside. | |||
displayed by another hypothetical protein coded by | |||
open reading frame Rv0948c, a novel instance of the | |||
existence of two monofunctional chorismate mutase 2222222222222222222222222 | |||
==References== | ==References== | ||
<references/> | <references/> | ||