Prion: Difference between revisions

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[[Image:3haf.png|left|200px|thumb|Crystal Structure of human prion [[3haf]]]]
[[Image:3haf.png|left|200px|thumb|Crystal Structure of human prion [[3haf]]]]
{{STRUCTURE_3haf|  PDB=3haf  | SIZE=300| SCENE=Prion/Cv/1 |right|CAPTION=human prion [[3haf]] }}
{{STRUCTURE_3haf|  PDB=3haf  | SIZE=300| SCENE=Prion/Cv/1 |right|CAPTION=human prion complex with Cd and Cl [[3haf]] }}


'''Prion''' (PrP) is a protein which becomes infectious upon undergoing conformation change to an amyloid form, which is self-propagating and becomes resistant to protease degradation.  The fungus ''Podospora anserine'' has a prion-like protein HET-S which undergoes a conformation change to amyloid form which prevents its colony from merging with non-compatible colonies.  Yeast prion proteins are Sup35 and Ure2.  The images at the left and at the right correspond to one representative prion, ''i.e.'' the crystal structure of human prion ([[2haf]]).
'''Prion''' (PrP) is a protein which becomes infectious upon undergoing conformation change to an amyloid form, which is self-propagating and becomes resistant to protease degradation.  The fungus ''Podospora anserine'' has a prion-like protein HET-S which undergoes a conformation change to amyloid form which prevents its colony from merging with non-compatible colonies.  Yeast prion proteins are Sup35 and Ure2.  The images at the left and at the right correspond to one representative prion, ''i.e.'' the crystal structure of human prion ([[2haf]]).


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==3D structures of prion==
''Update June 2011''


===PrP short polypeptides===
===PrP short polypeptides===
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[[3nvf]] – hPrP residues 138 -143 – human<br />
[[3nvf]] – hPrP residues 138 -143 – human<br />
[[2ol9]] - hPrP residues 170 – 175<br />
[[2ol9]] - hPrP residues 170 – 175<br />
[[3nhc]], [[3nhd]] - hPrP residues 127 – 132<br />
[[3nhc]], [[3nhd]], [[3md4]], [[3md5]] - hPrP residues 127 – 132<br />
[[2iv5]] - hPrP residues 173 -195 – NMR<br />
[[2iv5]] - hPrP residues 173 -195 – NMR<br />
[[1oei]] - hPrP residues 61 - 84 – NMR<br />
[[1oei]] - hPrP residues 61 - 84 – NMR<br />
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[[2fj3]] - rPrP C-terminal – NMR<br />
[[2fj3]] - rPrP C-terminal – NMR<br />
[[2joh]], [[2jom]] - rPrP C-terminal (mutant) – NMR<br />
[[2joh]], [[2jom]] - rPrP C-terminal (mutant) – NMR<br />
[[1xyw]] – ePrP C terminal - NMR<br />
[[2ku4]] - PrP C-terminal – horse<br />
[[2ku4]] - PrP C-terminal – horse<br />
[[3fva]] - ePrP C-terminal – NMR<br />
[[3fva]] - ePrP C-terminal – NMR<br />
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[[3haf]], [[3hak]], [[3hj5]], [[1i4m]] - hPrP C-terminal<br />
[[3haf]], [[3hak]], [[3hj5]], [[1i4m]] - hPrP C-terminal<br />
[[1hjm]], [[1hjn]], [[2kun]] – hPrP C-terminal – NMR<br />
[[1hjm]], [[1hjn]], [[2kun]] – hPrP C-terminal – NMR<br />
[[1h0l]], [[1fkc]], [[2k1d]], [[1fo7]], [[1e1s]], [[1e1g]], [[1e1j]], [[1e1p]], [[1e1u]], [[1e1w]], [[1qlx]], [[1qlz]], [[1qm0]], [[1qm1]], [[1qm2]], [[1qm3]] - hPrP C-terminal (mutant) - NMR<br />
[[1h0l]], [[1fkc]], [[2k1d]], [[1fo7]], [[1e1s]], [[1e1g]], [[1e1j]], [[1e1p]], [[1e1u]], [[1e1w]], [[1qlx]], [[1qlz]], [[1qm0]], [[1qm1]], [[1qm2]], [[1qm3]], [[1qlz]], [[1qm0]], [[1qm1]]- hPrP C-terminal (mutant) - NMR<br />
[[3heq]], [[3her]], [[3hes]], [[3hjx]] - hPrP C-terminal (mutant)<br />
[[2ku5]], [[2ku6]], [[2kfm]], [[2kfo]], [[2k5o]], [[1y16]], [[1y15]] - mPrP C-terminal  (mutant)<br />
[[2ku5]], [[2ku6]], [[2kfm]], [[2kfo]], [[2k5o]], [[1y16]], [[1y15]] - mPrP C-terminal  (mutant)<br />
[[1xyx]] - mPrP C-terminal<br />
[[1xyx]] - mPrP C-terminal<br />
[[1ag2]] - mPrP residues 121-231 - NMR<br />
[[1u3m]] – PrP C-terminal – chicken – NMR<br />
[[1u3m]] – PrP C-terminal – chicken – NMR<br />
[[1u5l]] - PrP C-terminal – turtle – NMR<br />
[[1u5l]] - PrP C-terminal – turtle – NMR<br />
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[[1xyq]] - PrP C-terminal – pig – NMR<br />
[[1xyq]] - PrP C-terminal – pig – NMR<br />
[[1dwy]], [[1dx0]], [[1dx1]] - bPrP C-terminal – NMR<br />
[[1dwy]], [[1dx0]], [[1dx1]] - bPrP C-terminal – NMR<br />
[[1dwz]] - bPrP residues 121-230 (mutant) - NMR<br />
[[1b10]] - ShPrP C-terminal – NMR
[[1b10]] - ShPrP C-terminal – NMR