Molecular modeling and visualization software: Difference between revisions
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*[[Swiss-PDBViewer = DeepView]], a powerful and popular free modeling package (not open-source). Although menu-driven, there is a significant learning curve. | *[[Swiss-PDBViewer = DeepView]], a powerful and popular free modeling package (not open-source). Although menu-driven, there is a significant learning curve. | ||
*[http://www.ysbl.york.ac.uk/~emsley/coot/ Coot] (Crystallographic Object-Oriented Toolkit -- also at [http://code.google.com/p/coot/ Google Code]), is very popular among crystallographers for building macromolecular models from electron density maps. Open source (GNU GPL). | *[http://www.ysbl.york.ac.uk/~emsley/coot/ Coot] (Crystallographic Object-Oriented Toolkit -- also at [http://code.google.com/p/coot/ Google Code]), is very popular among crystallographers for building macromolecular models from electron density maps. Open source (GNU GPL). | ||
*[[CCP4]] (Collaborative Computational Project No. 4: Software for Macromolecular X-Ray Crystallography) is very popular with crystallographers. Free for non-commercial use. | |||
*[http://xray.bmc.uu.se/~alwyn/index.html O] has long been popular with crystallographers for building macromolecular models from electron density maps. Free. (License unclear.) | *[http://xray.bmc.uu.se/~alwyn/index.html O] has long been popular with crystallographers for building macromolecular models from electron density maps. Free. (License unclear.) | ||
*[http://salilab.org/modeller/ Modeller] | *[http://salilab.org/modeller/ Modeller] | ||
