Sandbox 213: Difference between revisions

From Proteopedia
Jump to navigationJump to search
No edit summary
No edit summary
Line 62: Line 62:


Calmodulin uses a linear sequence of 12 amino acids to bind Ca<sup>2+</sup>.
Calmodulin uses a linear sequence of 12 amino acids to bind Ca<sup>2+</sup>.
Binding of Ca<sup>2+</sup> to the four sites induces a large conformational change causing the terminal helices to expose hydrophobic surfaces and also a long central α-helical segment. Ca<sup>2+</sup>-bound calmodulin binds to its targets with high affinity (K<sub>D</sub>≈10<sup>&minus;9</sup> mol.L<sup>&minus;1</sup>)<ref name="Colbran RJ, Brown AM. Calcium/calmodulin-dependent protein kinase II and synaptic plasticity. Curr Opin Neurobiol. 2004 Jun;14(3):318-27. PMID:15194112 doi:[[10.1016/j.conb.2004.05.008
Binding of Ca<sup>2+</sup> to the four sites induces a large conformational change causing the terminal helices to expose hydrophobic surfaces and also a long central α-helical segment. Ca<sup>2+</sup>-bound calmodulin binds to its targets with high affinity (K<sub>D</sub>≈10<sup>&minus;9</sup> mol.L<sup>&minus;1</sup>)<ref name="Fallon JL, Quiocho FA. A closed compact structure of native Ca(2+)-calmodulin. Structure. 2003 Oct;11(10):1303-7. PMID :[[14527397]]"/>.
]]"/>.


 


*'''Calmodulin bound to a target peptide'''
*'''Calmodulin bound to a target peptide'''
Line 76: Line 74:
The N-terminal and C-terminal regions approach each other and by their hydrophobic surfaces bind to it, rather like two hands holding a rope.  
The N-terminal and C-terminal regions approach each other and by their hydrophobic surfaces bind to it, rather like two hands holding a rope.  
This encourages the target sequence to adopt an α-helical arrangement so that it occupies the center of a hydrophobic tunnel.
This encourages the target sequence to adopt an α-helical arrangement so that it occupies the center of a hydrophobic tunnel.
The consequence of this interaction is a conformational change in the target, a state that persists only as long as the Ca<sup>2+</sup> concentration remains high <ref name="Colbran RJ, Brown AM. Calcium/calmodulin-dependent protein kinase II and synaptic plasticity. Curr Opin Neurobiol. 2004 Jun;14(3):318-27. PMID:15194112 doi:[[10.1016/j.conb.2004.05.008]]"/>.
The consequence of this interaction is a conformational change in the target, a state that persists only as long as the Ca<sup>2+</sup> concentration remains high <ref name="Fallon JL, Quiocho FA. A closed compact structure of native Ca(2+)-calmodulin. Structure. 2003 Oct;11(10):1303-7. PMID :[[14527397]]"/>.