NAC transcription factor: Difference between revisions
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1.Kubo et al (2005) Transcription swtiches for protoxylem and metaxylem vessel formation. Gene Dev.16, 1855-1860. | *1.Kubo et al (2005) Transcription swtiches for protoxylem and metaxylem vessel formation. Gene Dev.16, 1855-1860. | ||
2.Wang et al (2011) On-Off switches for secondary cell wall biosynthesis. Mol plant. doi:10.1093/mp/ssr098 | *2.Wang et al (2011) On-Off switches for secondary cell wall biosynthesis. Mol plant. doi:10.1093/mp/ssr098 | ||
3.Puranik et al. (2012) NAC proteins: regulation and role in stress tolerance. doi:10.1016/j.tplants.2012.2.14 | *3.Puranik et al. (2012) NAC proteins: regulation and role in stress tolerance. doi:10.1016/j.tplants.2012.2.14 | ||
4.Shen et al (2009) A bioinformatic analysis of NAC genes for plant cell wall development in relation to lignocellulosic bioenergy production. Bioener.Res. 2,217-232. | *4.Shen et al (2009) A bioinformatic analysis of NAC genes for plant cell wall development in relation to lignocellulosic bioenergy production. Bioener.Res. 2,217-232. | ||
5.Olsen et al (2005) NAC transcription factor : structurally distinct, functionally diverse. Trends Plant Sci. 10,79-87 | *5.Olsen et al (2005) NAC transcription factor : structurally distinct, functionally diverse. Trends Plant Sci. 10,79-87 | ||
6.Ernst et al (2004)Structure of the conserved domain of ANAC,a member of the NAC family of transcription factors. EMBO J 5,297-303 | *6.Ernst et al (2004)Structure of the conserved domain of ANAC,a member of the NAC family of transcription factors. EMBO J 5,297-303 | ||
7.Chen et al(2011)A structual view of the conserved domain of rice stress-responsive NAC1. Protein cell 2, 55-63 | *7.Chen et al(2011)A structual view of the conserved domain of rice stress-responsive NAC1. Protein cell 2, 55-63 | ||
8.Puranik et al. (2011) Molecular cloning and characterization of a membrane associated NAC family gene, SiNAC from foxtail millet. Mol. Biotech.49,138-150. | *8.Puranik et al. (2011) Molecular cloning and characterization of a membrane associated NAC family gene, SiNAC from foxtail millet. Mol. Biotech.49,138-150. | ||
9.Tran,L.S.P et al. (2009) Molecular characterization of stress-inducable GmNAC genes in soybean.Mol. Genet.Genomics 281.647-664. | *9.Tran,L.S.P et al. (2009) Molecular characterization of stress-inducable GmNAC genes in soybean.Mol. Genet.Genomics 281.647-664. | ||
10.Le, D.T. et al. (2011) Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress. DNA Res. 18, 263–276 | *10.Le, D.T. et al. (2011) Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress. DNA Res. 18, 263–276 | ||
11.Xie, Q. et al. (2002) SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals. Nature 419, 167–170 | *11.Xie, Q. et al. (2002) SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals. Nature 419, 167–170 | ||
12. Greve, K. et al. (2003) Interactions between plant RING-H2 and plantspecific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization. Biochem. J. 371, 97–108 | *12. Greve, K. et al. (2003) Interactions between plant RING-H2 and plantspecific NAC (NAM/ATAF1/2/CUC2) proteins: RING-H2 molecular specificity and cellular localization. Biochem. J. 371, 97–108 | ||
13.Yamaguchi, M. et al. (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in | *13.Yamaguchi, M. et al. (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in | ||
Arabidopsis. Plant Cell 22, 1249–1263 | Arabidopsis. Plant Cell 22, 1249–1263 | ||
14.Yamaguchi, M. et al. (2011)VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation. Plant Journal 66, 579-90 | *14.Yamaguchi, M. et al. (2011)VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation. Plant Journal 66, 579-90 | ||
15.Xie, Q. et al. (1999) GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus protein. Plant Mol. Biol. 39, 647–656 | *15.Xie, Q. et al. (1999) GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus protein. Plant Mol. Biol. 39, 647–656 | ||
16. Tran, L.S.P. et al. (2007) Co-expression of the stress inducible zinc finger homeodomain ZFHD1 and NAC transcription factors enhances expression of the ERD1 gene in Arabidopsis. Plant J. 49, 46–63 | *16. Tran, L.S.P. et al. (2007) Co-expression of the stress inducible zinc finger homeodomain ZFHD1 and NAC transcription factors enhances expression of the ERD1 gene in Arabidopsis. Plant J. 49, 46–63 | ||
17. Hao, Y.J. et al. (2010) Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation. Planta 232, 1033–1043 | *17. Hao, Y.J. et al. (2010) Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation. Planta 232, 1033–1043 | ||
18.Hao, Y.J. et al. (2011) Soybean NAC transcription factors promote abiotic stress tolerance and lateral root formation in transgenic plants. Plant J. 68, 302–313 | *18.Hao, Y.J. et al. (2011) Soybean NAC transcription factors promote abiotic stress tolerance and lateral root formation in transgenic plants. Plant J. 68, 302–313 | ||
19.Welner, D.H et al.(2012)DNA binding by the plant specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. Biochem J. doi:10.1092 | *19.Welner, D.H et al.(2012)DNA binding by the plant specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. Biochem J. doi:10.1092 | ||
20. Tran, L.S.P. et al. (2004) Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought responsive cis-element in the EARLY RESPONSIVE TO | *20. Tran, L.S.P. et al. (2004) Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought responsive cis-element in the EARLY RESPONSIVE TO | ||
DEHYDRATION STRESS 1 promoter. Plant Cell 16, 2481–2498 | DEHYDRATION STRESS 1 promoter. Plant Cell 16, 2481–2498 | ||
21. He, X.J. et al. (2005) AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. Plant J. 44, 903–916 | *21. He, X.J. et al. (2005) AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. Plant J. 44, 903–916 | ||
22. Lu, P.L. et al. (2007) A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis. Plant Mol. Biol. 63, 289–305 | *22. Lu, P.L. et al. (2007) A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis. Plant Mol. Biol. 63, 289–305 | ||
23. Kim, H.S. et al. (2007) Identification of a calmodulin-binding NAC protein (CBNAC) as a transcriptional repressor in Arabidopsis. J. Biol. Chem. 282, 36292–36302 | *23. Kim, H.S. et al. (2007) Identification of a calmodulin-binding NAC protein (CBNAC) as a transcriptional repressor in Arabidopsis. J. Biol. Chem. 282, 36292–36302 | ||
24. Delessert, C. et al. (2005) The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. Plant J. 43, 745–757 | *24. Delessert, C. et al. (2005) The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. Plant J. 43, 745–757 | ||
25.Yang S.D. et al. (2011) The Arabidopsis NAC Transcription Factor VNI2 Integrates Abscisic Acid Signals into Leaf Senescence via the COR/RD Genes. Plant Cell. 23, 2155–2168 | *25.Yang S.D. et al. (2011) The Arabidopsis NAC Transcription Factor VNI2 Integrates Abscisic Acid Signals into Leaf Senescence via the COR/RD Genes. Plant Cell. 23, 2155–2168 | ||
26.Fang, Y. et al. (2008) Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice. Mol. Genet. Genomics 280, 535–54 | *26.Fang, Y. et al. (2008) Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice. Mol. Genet. Genomics 280, 535–54 | ||
27.Christiansen, M.W. et al. (2011) Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved | *27.Christiansen, M.W. et al. (2011) Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved | ||
functions compared to both monocots and dicots. BMC Res. Notes 4,302 | functions compared to both monocots and dicots. BMC Res. Notes 4,302 | ||
28 Kjaersgaard, T. et al. (2011) Senescence-associated barley NAC (NAM, ATAF1, 2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domain. J. Biol. Chem. 286, 35418–35429 | *28 Kjaersgaard, T. et al. (2011) Senescence-associated barley NAC (NAM, ATAF1, 2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domain. J. Biol. Chem. 286, 35418–35429 | ||
29.Jensen, M.K. et al. (2010) The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signalling. Biochem. J. 426, 183–19 | *29.Jensen, M.K. et al. (2010) The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signalling. Biochem. J. 426, 183–19 | ||
30.Kleinow, T. et al. (2009) NAC domain transcription factor ATAF1 interacts with SNF1-related kinases and silencing of its subfamily | *30.Kleinow, T. et al. (2009) NAC domain transcription factor ATAF1 interacts with SNF1-related kinases and silencing of its subfamily | ||
causes severe developmental defects in Arabidopsis. Plant Sci. 177, 360–370 | causes severe developmental defects in Arabidopsis. Plant Sci. 177, 360–370 | ||
31.Seo, P.J. et al. (2008) Membrane-bound transcription factors in plants. Trends Plant Sci. 13, 550–556 | *31.Seo, P.J. et al. (2008) Membrane-bound transcription factors in plants. Trends Plant Sci. 13, 550–556 | ||
32. Kim, S.G. et al. (2010) Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice. Genomics 95, 56–6 | *32. Kim, S.G. et al. (2010) Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice. Genomics 95, 56–6 | ||
33. Yamaguchi, M. et al. (2008) Vascular -related NAC-domain 7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J. 55,652-664 | *33. Yamaguchi, M. et al. (2008) Vascular -related NAC-domain 7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J. 55,652-664 | ||
34. Zhong, R. et al. (2010). Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Molecular Plant 3, 1087-1103. | *34. Zhong, R. et al. (2010). Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Molecular Plant 3, 1087-1103. | ||
35. Zhong, R. et al . (2010) Functional Characterization of Poplar Wood-Associated NAC Domain Transcription Factors. Plant Physiol. 152, 1044-1055 | *35. Zhong, R. et al . (2010) Functional Characterization of Poplar Wood-Associated NAC Domain Transcription Factors. Plant Physiol. 152, 1044-1055 | ||
36. Zhong, R.et al. (2010). Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Molecular Plant 3, 1087-1103 | *36. Zhong, R.et al. (2010). Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Molecular Plant 3, 1087-1103 | ||
37. Ohashi-Ito,K. et al. (2010). Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 Directly Regulates the Genes That Govern Programmed Cell Death and Secondary Wall Formation during Xylem Differentiation. Plant Cell 22,3461–3473 | 37. Ohashi-Ito,K. et al. (2010). Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 Directly Regulates the Genes That Govern Programmed Cell Death and Secondary Wall Formation during Xylem Differentiation. Plant Cell 22,3461–3473 | ||