1chm: Difference between revisions
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New page: left|200px<br /><applet load="1chm" size="450" color="white" frame="true" align="right" spinBox="true" caption="1chm, resolution 1.9Å" /> '''ENZYMATIC MECHANISM O... |
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[[Image:1chm.gif|left|200px]]<br /><applet load="1chm" size=" | [[Image:1chm.gif|left|200px]]<br /><applet load="1chm" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1chm, resolution 1.9Å" /> | caption="1chm, resolution 1.9Å" /> | ||
'''ENZYMATIC MECHANISM OF CREATINE AMIDINOHYDROLASE AS DEDUCED FROM CRYSTAL STRUCTURES'''<br /> | '''ENZYMATIC MECHANISM OF CREATINE AMIDINOHYDROLASE AS DEDUCED FROM CRYSTAL STRUCTURES'''<br /> | ||
==Overview== | ==Overview== | ||
Crystal structures of the enzyme creatine amidinohydrolase (creatinase, EC | Crystal structures of the enzyme creatine amidinohydrolase (creatinase, EC 3.5.3.3) with two different inhibitors, the reaction product sarcosine and the substrate creatine, bound have been analyzed by X-ray diffraction methods. With the inhibitor carbamoyl sarcosine, two different crystal forms at different pH values have been determined. An enzymatic mechanism is proposed on the basis of the eight structures analyzed. The enzyme binds substrate and inhibitor in a distorted geometry where the urea resonance is broken. His232 is the general base and acid, and acts as a proton shuttle. It withdraws a proton from water 377 and donates it to the N(3) atom of the guanidinium group. OH- 377 adds to the C(1) atom of the guanidinium group to form a urea hydrate. Proton withdrawal by His232 leads to products. The reaction product sarcosine binds to the active site in a reverse orientation. The free enzyme was found to have a bicarbonate bound to the active site. | ||
==About this Structure== | ==About this Structure== | ||
1CHM is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida] with CMS as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Creatinase Creatinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.3 3.5.3.3] Full crystallographic information is available from [http:// | 1CHM is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida] with <scene name='pdbligand=CMS:'>CMS</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Creatinase Creatinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.3 3.5.3.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CHM OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: Pseudomonas putida]] | [[Category: Pseudomonas putida]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Bartlett, P | [[Category: Bartlett, P A.]] | ||
[[Category: Hoeffken, H | [[Category: Hoeffken, H W.]] | ||
[[Category: Huber, R.]] | [[Category: Huber, R.]] | ||
[[Category: Knof, S | [[Category: Knof, S H.]] | ||
[[Category: Moellering, H.]] | [[Category: Moellering, H.]] | ||
[[Category: Schumacher, G.]] | [[Category: Schumacher, G.]] | ||
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[[Category: creatinase]] | [[Category: creatinase]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:06:09 2008'' | ||