1db5: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /> <applet load="1db5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1db5, resolution 2.80Å" /> '''HUMAN S-PLA2 IN COM... |
No edit summary |
||
| Line 1: | Line 1: | ||
[[Image:1db5.gif|left|200px]]<br /> | [[Image:1db5.gif|left|200px]]<br /><applet load="1db5" size="350" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="1db5" size=" | |||
caption="1db5, resolution 2.80Å" /> | caption="1db5, resolution 2.80Å" /> | ||
'''HUMAN S-PLA2 IN COMPLEX WITH INDOLE 6'''<br /> | '''HUMAN S-PLA2 IN COMPLEX WITH INDOLE 6'''<br /> | ||
==Overview== | ==Overview== | ||
A lead compound obtained from a high volume human non-pancreatic secretory | A lead compound obtained from a high volume human non-pancreatic secretory phospholipase A2 (hnps-PLA2) screen has been developed into a potent inhibitor using detailed structural knowledge of inhibitor binding to the enzyme active site. Four crystal structures of hnps-PLA2 complexed with a series of increasingly potent indole inhibitors were determined and used as the structural basis for both understanding this binding and providing valuable insights for further development. The application of structure-based drug design has made possible improvements in the binding of this screening lead to the enzyme by nearly three orders of magnitude. Furthermore, the optimized structure (LY311727) displayed 1,500-fold selectivity when assayed against porcine pancreatic s-PLA2. | ||
==Disease== | ==Disease== | ||
| Line 11: | Line 10: | ||
==About this Structure== | ==About this Structure== | ||
1DB5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with CA and 6IN as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] Full crystallographic information is available from [http:// | 1DB5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=6IN:'>6IN</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DB5 OCA]. | ||
==Reference== | ==Reference== | ||
| Line 18: | Line 17: | ||
[[Category: Phospholipase A(2)]] | [[Category: Phospholipase A(2)]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Chirgadze, N | [[Category: Chirgadze, N Y.]] | ||
[[Category: Schevitz, R | [[Category: Schevitz, R W.]] | ||
[[Category: Wery, J | [[Category: Wery, J P.]] | ||
[[Category: 6IN]] | [[Category: 6IN]] | ||
[[Category: CA]] | [[Category: CA]] | ||
| Line 26: | Line 25: | ||
[[Category: s-pla2; structure-based drug design]] | [[Category: s-pla2; structure-based drug design]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:14:49 2008'' | ||